Skip to main content

STPT scan to Zarr conversion

Project description

STPT to Zarr converter

Convert STPT scan dataset to Zarr.

Install

pip install stpt2zarr

Requirements

  • click
  • dask
  • distributed
  • imaxt_image
  • python_dateutil
  • xarray
  • zarr

Usage

Arguments

  • input_path: the root folder of the STPT scan containing a mosaic file
  • output_path: the location where to store the converted output in Zarr format

From Python script

from stpt2zarr import stpt2zarr

stpt2zarr(input_path, output_path)

From the command line

stpt2zarr input_path output_path

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

stpt2zarr-0.1.8.tar.gz (7.8 kB view hashes)

Uploaded Source

Built Distribution

stpt2zarr-0.1.8-py3-none-any.whl (8.9 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page