svVascularize
The svVascularize (svv) is an open-source API for automated vascular generation and multi-fidelity hemodynamic simulation written in Python. Often small-caliber vessels are difficult or infeasible to obtain from experimental data sources despite playing important roles in blood flow regulation and cell microenvironments. svVascularize aims to provide tissue engineers and computational hemodynamic scientists with de novo vasculature that can easily be applied in biomanufacturing applications or computational fluid dynamic (CFD) analysis.
- Website: https://simvascular.github.io/svVascularize/
- PyPi: https://pypi.org/project/svv/
- Source code: https://github.com/SimVascular/svVascularize
Installation
The package is published on PyPI as svv:
pip install svv
If you are installing into an existing environment and hit NumPy ABI errors such as
_ARRAY_API not found or numpy.core.multiarray failed to import, recreate the
environment with a NumPy version supported by your Python version. For Python
3.9–3.12, use NumPy 1.x:
python -m pip install --upgrade pip
python -m pip install --force-reinstall "numpy<2" svv
Python 3.13 requires NumPy 2.1 or newer:
python -m pip install --upgrade pip
python -m pip install --force-reinstall "numpy>=2.1" svv
On clusters / HPC systems (for example Stanford Sherlock), use a recent Python (3.9–3.13) and pip, and install into a
clean virtual environment or user site-packages.
Basic usage
Import the primary classes from the root package and supporting types from their public subpackages:
from svv import Domain, Forest, Simulation, Tree
from svv.domain import Patch
from svv.tree import TreeParameters, UnitSystem
dir(svv) lists the curated root API. Explicit imports are recommended for
application code, and existing deep import paths remain supported for
compatibility.
Metadata
Release files for svv 0.0.56
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| svv-0.0.56.tar.gz | 4.1 MB | Details |
Built distributions (wheels)
| File | Reset | |||
|---|---|---|---|---|
| svv-0.0.56-py3-none-win_amd64.whl | Python 3 | none | Windows x86-64 | Details |
| svv-0.0.56-py3-none-musllinux_1_2_x86_64.whl | Python 3 | none | Linux musl 1.2+ x86-64 | Details |
| svv-0.0.56-py3-none-musllinux_1_2_aarch64.whl | Python 3 | none | Linux musl 1.2+ ARM64 | Details |
| svv-0.0.56-py3-none-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl | Python 3 | none | Linux glibc 2.28+ x86-64, Linux glibc 2.24+ x86-64 | Details |
| svv-0.0.56-py3-none-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl | Python 3 | none | Linux glibc 2.24+ ARM64, Linux glibc 2.28+ ARM64 | Details |
| svv-0.0.56-py3-none-macosx_11_0_universal2.whl | Python 3 | none | macOS 11.0+ universal2 (ARM64, x86-64) | Details |
Total release size: 20.4 MB
Release files / svv-0.0.56.tar.gz
| Download URL | svv-0.0.56.tar.gz |
|---|---|
| Size | 4.1 MB |
| Tags | Source |
|
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.14
|
Release files / svv-0.0.56-py3-none-win_amd64.whl
| Download URL | svv-0.0.56-py3-none-win_amd64.whl |
|---|---|
| Size | 1.9 MB |
| Tags | Python 3 Windows x86-64 |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.14
|
Release files / svv-0.0.56-py3-none-musllinux_1_2_x86_64.whl
| Download URL | svv-0.0.56-py3-none-musllinux_1_2_x86_64.whl |
|---|---|
| Size | 3.3 MB |
| Tags | Linux musl 1.2+ x86-64 Python 3 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.14
|
Release files / svv-0.0.56-py3-none-musllinux_1_2_aarch64.whl
| Download URL | svv-0.0.56-py3-none-musllinux_1_2_aarch64.whl |
|---|---|
| Size | 3.2 MB |
| Tags | Linux musl 1.2+ ARM64 Python 3 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.14
|
Release files / svv-0.0.56-py3-none-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl
| Download URL | svv-0.0.56-py3-none-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl |
|---|---|
| Size | 2.2 MB |
| Tags | Linux glibc 2.24+ x86-64 Linux glibc 2.28+ x86-64 Python 3 |
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No |
| Uploaded via |
twine/7.0.0 CPython/3.12.14
|
Release files / svv-0.0.56-py3-none-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl
| Download URL | svv-0.0.56-py3-none-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl |
|---|---|
| Size | 2.2 MB |
| Tags | Linux glibc 2.24+ ARM64 Linux glibc 2.28+ ARM64 Python 3 |
|
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No |
| Uploaded via |
twine/7.0.0 CPython/3.12.14
|
Release files / svv-0.0.56-py3-none-macosx_11_0_universal2.whl
| Download URL | svv-0.0.56-py3-none-macosx_11_0_universal2.whl |
|---|---|
| Size | 3.4 MB |
| Tags | Python 3 macOS 11.0+ universal2 (ARM64, x86-64) |
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| Uploaded via |
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