A minimal block sparse symmetric and fermionic tensor python library
Project description
symmray
A minimal library for block sparse, abelian symetric and fermionic arrays,
designed to look as much as possible like standard ndarrays, whose blocks can
be backed by numpy, torch or any other autoray compatible library.
Installation
Installing the latest version directly from github:
If you want to checkout the latest version of features and fixes, you can install directly from the github repository:
pip install -U git+https://github.com/jcmgray/symmray.git
Installing a local, editable development version:
If you want to make changes to the source code and test them out, you can install a local editable version of the package:
git clone https://github.com/jcmgray/symmray.git
pip install --no-deps -U -e symmray/
Usage
symmray objects are designed so that, as much as possible, one can interact
with them in the same way as standard arrays. You can use the functions from
the symmray namespace directly:
import symmray as sr
# create some random arrays:
a, b, c, d, e, f = [sr.utils.rand_index("Z2", d) for d in [2, 3, 4, 5, 6, 7]]
x = sr.utils.get_rand("Z2", shape=[a, b, c.conj(), d], fermionic=True)
y = sr.utils.get_rand("Z2", shape=[e, a.conj(), f, c], fermionic=True)
x, y
# (Z2FermionicArray(shape~(2, 3, 4, 5):[++-+], charge=0, num_blocks=8),
# Z2FermionicArray(shape~(6, 2, 7, 4):[+--+], charge=0, num_blocks=8))
# contract them:
z = sr.tensordot(x, y, axes=[(0, 2), (1, 3)])
z
# Z2FermionicArray(shape~(3, 5, 6, 7):[+++-], charge=0, num_blocks=8)
print(z)
# Z2FermionicArray(ndim=4, charge=0, indices=[
# (3 = 2+1 : +[0,1])
# (5 = 3+2 : +[0,1])
# (6 = 2+4 : +[0,1])
# (7 = 6+1 : -[0,1])
# ], num_blocks=8, backend=numpy, dtype=float64)
# fuse and decompose:
sr.linalg.svd(z.fuse((0, 3), (1, 2)))
# (Z2FermionicArray(shape~(21, 21):[++], charge=0, num_blocks=2),
# BlockVector(total_size=21, num_blocks=2),
# Z2FermionicArray(shape~(21, 30):[-+], charge=0, num_blocks=2))
or you can use the automatic dispatch library autoray to support multiple
backends including symmray:
import autoray as ar
z = ar.do("tensordot", x, y, axes=[(0, 2), (1, 3)])
or you can use the python array api:
xp = x.__array_namespace__()
z = xp.tensordot(x, y, axes=[(0, 2), (1, 3)])
symmray also uses autoray internally to handle manipulating blocks within
an array, meaning that these can be numpy, torch, jax or any other
autoray compatible library.
Whilst block sparse arrays do not have such a well defined notion of shape as
dense arrays, for ease and compatibility with other libraries, symmray arrays
do have a .shape attribute which is the shape of the dense array that would
be returned by calling to_dense on the array, and a similarly defined
.size. Likewise, symmray supports fusing and unfusing of indices via
reshape (as long as it is clear what is meant by the new shape).
Quick-start tensor networks and Hamiltonians
symmray provides constructors for various quimb.tensor.TensorNetwork networks:
TN_abelian_from_edges_randTN_fermionic_from_edges_randPEPS_abelian_rand(2D specific)PEPS_fermionic_rand(2D specific)
Along with constructors for common hamiltonians:
ham_tfim_from_edgesham_heisenberg_from_edgesham_fermi_hubbard_from_edgesham_fermi_hubbard_spinless_from_edges(AKA 't-V' model)
These constructors automatically chooose various defaults. See the examples
folder for usage.
Block sparse abelian symmetric arrays
The core AbelianArray object consists of 4 main components:
.indices: a sequence ofBlockIndexinstances describing the charge distribution and 'dualness' of each dimension..charge: an overall charge for the array, which sets which combinations of index charges ('sectors') are allowed..blocks: a dict mapping each non-zero sector to a 'raw' array..symmetry: an object defining allowed charges and how they combine.
Specific subclasses of AbelianArray have a static .symmetry class
attribute.
The BlockIndex object consists of 2 main components:
-
.chargemap: a dict mapping each charge to its size. The total size of the index is the sum of the sizes of all charges. -
.dual: a boolean indicating whether the index is 'dual' or not. By convention:dual=Falsemeans index flows 'outwards' / (+ve) / ket-likedual=Truemeans index flows 'inwards' / (-ve) / bra-like
One convenient way to create AbelianArray instances is via the from_fill_fn
method, which takes a function with signature fn(shape) -> array_like and
uses it to fill each valid sector of the array.
import symmray as sr
import numpy as np
indices = (
sr.BlockIndex(chargemap={0: 3, 1: 4}, dual=False),
sr.BlockIndex(chargemap={0: 5, 1: 6}, dual=True),
)
x = sr.Z2Array.from_fill_fn(
fill_fn=np.ones,
indices=indices,
charge=1,
)
x
# Z2Array(shape~(7, 11):[+-], charge=1, num_blocks=2)
x.blocks
# {(0,
# 1): array([[1., 1., 1., 1., 1., 1.],
# [1., 1., 1., 1., 1., 1.],
# [1., 1., 1., 1., 1., 1.]]),
# (1,
# 0): array([[1., 1., 1., 1., 1.],
# [1., 1., 1., 1., 1.],
# [1., 1., 1., 1., 1.],
# [1., 1., 1., 1., 1.]])}
We can pictorially represent this like so:
You can also create AbelianArray instances using the methods:
AbelianArray(indices, charge, blocks)AbelianArray.from_blocks(blocks, duals, charges)which calculates the index chargemaps from the sectors and blocks themselves.AbelianArray.random(indices, charge)which uses a randomfill_fnAbelianArray.from_dense(array, index_maps, duals, charge)which converts a dense array to a block sparse array given a mapping for each axis, which specifies the charge of each linear index in the dense array.
Key functions which match the numpy versions are:
conjreshapetensordottracetranspose
With additional symmray specific key functions:
fusemultiply_diagonal
Fuse in particular is a crucial function for A. performing efficient
contractions, B. performing linear algebra decompositions, as well as various
other tensor network manipulations. You can either fuse and unfuse directly, or
by using reshape. Note that if a symmray array is quite sparse (e.g. with
U1 symmetry), then the resulting fused/reshaped shape will not necessarily
match the dense specification.
The key function tensordot can use one of two methods.
tensordot(x, y, axes, mode="fused"): fuse the two arrays into block diagonal matrices and then unfuse the result. This can be much faster, though possibly requires explicitly filling missing blocks with zeros.tensordot(x, y, axes, mode="blockwise"): compute the contraction by directly looping over the blocks ofxandyand contracting them. This has quite high overhead for large numbers of blocks.
Fermionic arrays
The approach to fermionic arrays symmray takes is equivalent to the
'Grassmann' or graded algebra approach. This associates a fermionic parity to
each charge, combined with the directionality specified by dual, allows
all fermionic swaps and the relevant sector phase changes to be handled
essentially locally.
The core FermionicArray is a subclass of AbelianArray and instantiated in
the same way:
indices = (
sr.BlockIndex(chargemap={-1: 2, 0: 2, 1: 3}, dual=False),
sr.BlockIndex(chargemap={0: 2, 2: 3, 3: 4}, dual=True),
)
x = sr.U1FermionicArray.random(
indices=indices,
charge=-2,
)
print(x)
# U1FermionicArray(ndim=2, charge=-2, indices=[
# (7 = 2+2+3 : +[-1,0,1])
# (9 = 2+3+4 : -[0,2,3])
# ], num_blocks=2, backend=numpy, dtype=float64)
Phases are lazily tracked into the attribute .phases when:
- transposing
- fusing
- conjugating
- contracting via tensordot or
__matmul__/@ - tracing
- linear algebra decompositions
via the methods:
FermionicArray.phase_flip: virtually insert 'parity' tensors on some axesFermionicArray.phase_transpose: compute the phase of a 'virtual' transpose
And inserted when needed using:
FermionicArray.phase_sync: actually multiply the blocks by the phases.
Multiple odd-parity fermionic arrays - oddpos
If you want to work with networks involving multiple odd-parity tensors then
you must supply any sortable label oddpos to the FermionicArray
constructor, which acts like a sequence of dummy indices with odd-parity.
Whenever two arrays with oddpos are contracted, a global phase
is possibly inserted coming from sorting these dummy odd-parity indices.
An initial single value of oddpos is converted into a length 1 tuple, and
these are then concatenated and sorted when two arrays are contracted. For
example, if a and b have accrued the following oddpos values:
oddpos_a = (2, 3, 5)
oddpos_b = (4, 6,)
their contraction would result in:
(2, 3, 5, 4, 6)
-> sort introduces phase ->
(2, 3, 4, 5, 6)
-> neighboring oddpos pairs can then be cancelled ->
oddpos_new = (6,)
This gives a canonical sign to the overall network that is handled
automatically and locally (once the initial oddpos values are chosen.)
The phase is tracked lazily via FermionicArray.phase_global.
If for some reason you would like to create a FermionicArray with multiple
labels then you should supply a list of labels.
Conjugation and tensor networks
Conjugating a fermionic array is handled by the .conj() method, with two
notable options, phase_permutation=True by default and phase_dual=False by
default. The former applies phases as if we had reversed the order of axes
(though we don't change the data layout). The latter applies 'virtual' parity
tensors to dual indices, which can be desired if they are the 'dangling' legs
of a tensor network.
By default, only the first happens. This implies if you have a tensor network wavefunction $|\psi\rangle$ where all dangling indices are ket-like (dual=False), then conjugating each tensor locally gives you the bra wavefunction $\langle\psi|$ such that the contraction $\langle\psi|\psi\rangle$ yields the norm squared of the wavefunction.
If the tensor network has both bra-like and ket-like dangling indices (e.g. in the infinite setting or using cluster approximations), then the dangling dual legs of the conjugated network must be explicitly phase-flipped.
For example, in the following network:
the only index that needs to be phase-flipped beyond phase_permutation is the
orange dangling 'ket' index in the bra $\langle\psi|$, indicated by the red
diamond.
Local fermionic operators
Many tensor network algorithms involve applying local fermionic operators to
the wavefunction. Such local operators need to be expressed in a local basis
with a particular ordering and resulting phases. symmray provides several
common operators:
fermi_hubbard_local_array:
$$ -t (a_\uparrow^\dagger b_\uparrow + b_\uparrow^\dagger a_\uparrow + a_\downarrow^\dagger b_\downarrow + b_\downarrow^\dagger a_\downarrow) + U(a_\uparrow^\dagger a_\uparrow a_\downarrow^\dagger a_\downarrow + b_\uparrow^\dagger b_\uparrow b_\downarrow^\dagger b_\downarrow) - \mu (a_\uparrow^\dagger a_\uparrow + a_\downarrow^\dagger a_\downarrow + b_\uparrow^\dagger b_\uparrow + b_\downarrow^\dagger b_\downarrow) $$
fermi_hubbard_spinless_local_array:
$$ -t(a^\dagger b + b^\dagger a) + V a^\dagger a b^\dagger b - \mu(a^\dagger a + b^\dagger b) $$
fermi_number_operator_spinful_local_array:
$$ a_\uparrow^\dagger a_\uparrow + a_\downarrow^\dagger a_\downarrow $$
fermi_number_operator_spinless_local_array:
$$ a^\dagger a $$
fermi_spin_operator_local_array:
$$ \frac{1}{2}(a_\uparrow^\dagger a_\uparrow - a_\downarrow^\dagger a_\downarrow) $$
plus lower level functions for building custom ones:
build_local_fermionic_arraybuild_local_fermionic_elements
These latter functions take a specification of terms, which is a sequence of tuples of the
form (coeff, ops) where ops is a sequence of symbolic FermionicOperator
objects, (or equivalent pair (label, op)).
Secondly they take a specification of bases. This is a sequence of each local
basis, each a sequence of FermionicOperator objects.
For example, imagine we want to build the term:
$$8 n_a n_b - 2 (n_a + n_b)= 8 a^\dagger a b^\dagger b - 2 a^\dagger a - 2 b^\dagger b$$
into an array with elements defined:
$$o = \langle i' | \langle j' | \hat O | i \rangle | j \rangle$$
where the two bases are given by: $| i \rangle = {|0\rangle, a^\dagger|0\rangle}$ and $| j \rangle = {|0\rangle, b^\dagger|0\rangle}$. We can build this operator as follows:
a, b = map(sr.FermionicOperator, 'ab')
# you can also use strings or pairs like
# adag = 'a+' or ('a', '+')
# a = 'a-' or ('a', '-')
terms = [
(+8, (a.dag, a, b.dag, b)),
(-2, (a.dag, a)),
(-2, (b.dag, b)),
]
bases = [
[(), (a.dag,)],
[(), (b.dag,)],
]
# get just the non-zero elements (with phases)
sr.build_local_fermionic_elements(
terms, bases
)
# {(0, 1, 0, 1): -2.0, (1, 0, 1, 0): -2.0, (1, 1, 1, 1): -4.0}
To build an actual fermionic array we need to specify a symmetry and a index_map for each local basis that maps each index to a charge. For example, if we want to build the above operator into a U1FermionicArray we could do:
sr.build_local_fermionic_array(
terms,
bases,
symmetry="U1",
index_maps=[
(0, 1), # charges for basis i
(0, 1), # charges for basis j
]
)
# U1FermionicArray(shape~(2, 2, 2, 2):[++--], charge=0, num_blocks=6)
Fermi-hubbard and spinless fermi-hubbard operators have built-in local functions:
sr.fermi_hubbard_local_array("U1U1", t=1.0, U=8.0, mu=5).blocks
# {((0, 0), (0, 0), (0, 0), (0, 0)): array([[[[0.]]]]),
# ((0, 0), (0, 1), (0, 0), (0, 1)): array([[[[-5.]]]]),
# ((0, 0), (0, 1), (0, 1), (0, 0)): array([[[[-1.]]]]),
# ((0, 0), (1, 0), (0, 0), (1, 0)): array([[[[-5.]]]]),
# ((0, 0), (1, 0), (1, 0), (0, 0)): array([[[[-1.]]]]),
# ((0, 0), (1, 1), (0, 0), (1, 1)): array([[[[-2.]]]]),
# ((0, 0), (1, 1), (0, 1), (1, 0)): array([[[[1.]]]]),
# ((0, 0), (1, 1), (1, 0), (0, 1)): array([[[[-1.]]]]),
# ((0, 0), (1, 1), (1, 1), (0, 0)): array([[[[0.]]]]),
# ((0, 1), (0, 0), (0, 0), (0, 1)): array([[[[-1.]]]]),
# ((0, 1), (0, 0), (0, 1), (0, 0)): array([[[[-5.]]]]),
# ((0, 1), (0, 1), (0, 1), (0, 1)): array([[[[10.]]]]),
# ((0, 1), (1, 0), (0, 0), (1, 1)): array([[[[-1.]]]]),
# ((0, 1), (1, 0), (0, 1), (1, 0)): array([[[[10.]]]]),
# ((0, 1), (1, 0), (1, 0), (0, 1)): array([[[[0.]]]]),
# ((0, 1), (1, 0), (1, 1), (0, 0)): array([[[[-1.]]]]),
# ((0, 1), (1, 1), (0, 1), (1, 1)): array([[[[-7.]]]]),
# ((0, 1), (1, 1), (1, 1), (0, 1)): array([[[[1.]]]]),
# ((1, 0), (0, 0), (0, 0), (1, 0)): array([[[[-1.]]]]),
# ((1, 0), (0, 0), (1, 0), (0, 0)): array([[[[-5.]]]]),
# ((1, 0), (0, 1), (0, 0), (1, 1)): array([[[[1.]]]]),
# ((1, 0), (0, 1), (0, 1), (1, 0)): array([[[[0.]]]]),
# ((1, 0), (0, 1), (1, 0), (0, 1)): array([[[[10.]]]]),
# ((1, 0), (0, 1), (1, 1), (0, 0)): array([[[[1.]]]]),
# ((1, 0), (1, 0), (1, 0), (1, 0)): array([[[[10.]]]]),
# ((1, 0), (1, 1), (1, 0), (1, 1)): array([[[[-7.]]]]),
# ((1, 0), (1, 1), (1, 1), (1, 0)): array([[[[1.]]]]),
# ((1, 1), (0, 0), (0, 0), (1, 1)): array([[[[0.]]]]),
# ((1, 1), (0, 0), (0, 1), (1, 0)): array([[[[1.]]]]),
# ((1, 1), (0, 0), (1, 0), (0, 1)): array([[[[-1.]]]]),
# ((1, 1), (0, 0), (1, 1), (0, 0)): array([[[[-2.]]]]),
# ((1, 1), (0, 1), (0, 1), (1, 1)): array([[[[1.]]]]),
# ((1, 1), (0, 1), (1, 1), (0, 1)): array([[[[-7.]]]]),
# ((1, 1), (1, 0), (1, 0), (1, 1)): array([[[[1.]]]]),
# ((1, 1), (1, 0), (1, 1), (1, 0)): array([[[[-7.]]]]),
# ((1, 1), (1, 1), (1, 1), (1, 1)): array([[[[-4.]]]])}
(Note that zero blocks are stored - for the sake of correctness when fusing and exponentiating.) The spinful versions uses the local basis:
$$ |i\rangle = {|00\rangle, c_{\downarrow}|00\rangle, c_{\uparrow}|00\rangle, c_{\uparrow}c_{\downarrow}|00\rangle} $$
which has a U1 index_map of charges [0, 1, 1, 2] or a U1U1 index_map of
charges [(0, 0), (0, 1), (1, 0), (1, 1)].
Both fermi_hubbard_local_array and fermi_hubbard_spinless_local_array also take a coordinations argument which specifies the lattice coordination of the two sites. This scales any on-site (i.e. 1-local) terms by inverse coordination, so that these terms can be included in the pairwise (i.e. 2-local) arrays without overcounting. For example in a 1D open chain the boundary coordinations would be (1, 2) and (2, 1), whereas the bulk would be (2, 2). The utility function sr.parse_edges_to_site_info fills in coordination information.
Linear Algebra
symmray supports abelian and fermionic versions of the following functions:
norm: frobenius normsvd: singular value decompositionqr: QR decompositioneigh: hermitian eigendecompositionexpm: matrix exponential
Tensor network specific functions as used by quimb:
svd_truncated: svd with truncation based on maximum bond dimension and/or a cutoff threshold with various modes.eigh_truncated: hermitian eigendecomposition with truncation based on maximum bond dimension and/or a cutoff threshold with various modes.qr_stabilized: qr decomposition with sign stabilization of the R matrix diagonal, which is beneficial for gradient based optimization.
Diagonal matrices and vectors: BlockVector
Decompositions such as SVD and eigendecomposition return singular and eigen
values as a special type of block sparse array, a BlockVector. These are
essentially just a dict of single charges to blocks, and don't contain any
dualness information. Simple math operations are supported, as well as
multiplying them into a tensor with the function multiply_diagonal.
Symmetries
symmray has the following symmetries built in:
Z2: parity symmetryU1: abelian charge symmetryZ2Z2: two parity symmetriesU1U1: two abelian charge symmetries
These are encasuplated in classes which describe:
- the zero charge and valid charges
- how to combine charges
- how to negate charges
- ...
See the symmray.symmetries module for how to define your own symmetries. You
can supply these directly to AbelianArray and FermionicArray constructors
(dynamic symmetry), or you can create your own specific subclasses of these
classes (static symmetry), such as U1U1FermionicArray.
Other libraries
Some notable other libraries with overlapping functionality:
abeliantensors: https://github.com/mhauru/abeliantensorsyastn: https://github.com/yastn/yastnpyblock3: https://github.com/block-hczhai/pyblock3-previewtensornetwork: https://github.com/google/TensorNetworkgrassmanntn: https://github.com/ayosprakob/grassmanntnTensorKit.jl: https://github.com/Jutho/TensorKit.jl
References
This library was developed in part for the work:
"Fermionic tensor network contraction for arbitrary geometries" - Yang Gao, Huanchen Zhai, Johnnie Gray, Ruojing Peng, Gunhee Park, Wen-Yuan Liu, Eirik F. Kjønstad, Garnet Kin-Lic Chan - https://arxiv.org/abs/2410.02215
If symmray has been useful to you, and to encourage development, please consider citing it.
@article{gao2024fermionic,
title={Fermionic tensor network contraction for arbitrary geometries},
author={Gao, Yang and Zhai, Huanchen and Gray, Johnnie and Peng, Ruojing and Park, Gunhee and Liu, Wen-Yuan and Kjønstad, Eirik F and Chan, Garnet Kin-Lic},
journal={arXiv preprint arXiv:2410.02215},
year={2024}
}
The following is a very incomplete list of other helpful references:
Abelian symmetries:
-
"Tensor network decompositions in the presence of a global symmetry" - Sukhwinder Singh, Robert N. C. Pfeifer, Guifre Vidal - https://arxiv.org/abs/0907.2994
-
"Implementing global Abelian symmetries in projected entangled-pair state algorithms" - B. Bauer, P. Corboz, R. Orus, M. Troyer - https://arxiv.org/abs/1010.3595
-
"Advances on Tensor Network Theory: Symmetries, Fermions, Entanglement, and Holography" - Roman Orus - https://arxiv.org/abs/1407.6552
Fermionic Tensor Networks
-
"Fermionic Projected Entangled Pair States" - Christina V. Kraus, Norbert Schuch, Frank Verstraete, J. Ignacio Cirac - https://arxiv.org/abs/0904.4667
-
"Fermionic multi-scale entanglement renormalization ansatz" - Philippe Corboz, Guifre Vidal - https://arxiv.org/abs/0907.3184
-
"Simulation of strongly correlated fermions in two spatial dimensions with fermionic Projected Entangled-Pair States" - Philippe Corboz, Roman Orus, Bela Bauer, Guifre Vidal - https://arxiv.org/abs/0912.0646
-
"Fermionic Implementation of Projected Entangled Pair States Algorithm" - Iztok Pizorn, Frank Verstraete - https://arxiv.org/abs/1003.2743
symmray is most closely related to the following 'local' approaches:
-
"Grassmann tensor network states and its renormalization for strongly correlated fermionic and bosonic states" - Zheng-Cheng Gu, Frank Verstraete, Xiao-Gang Wen - https://arxiv.org/abs/1004.2563
-
"Gradient optimization of fermionic projected entangled pair states on directed lattices" - Shao-Jun Dong, Chao Wang, Yongjian Han, Guang-can Guo, Lixin He - https://arxiv.org/abs/1812.03657
-
"Fermionic tensor network methods" - Quinten Mortier, Lukas Devos, Lander Burgelman, Bram Vanhecke, Nick Bultinck, Frank Verstraete, Jutho Haegeman, Laurens Vanderstraeten - https://arxiv.org/abs/2404.14611
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