synthetic-data-metrics 0.0.3

Synthetic Data Metrics is a Python library for evaluating synthetic data quality across a wide range of data types (image, tabular, time series, language) and approaches to evaluation.

PackageName

About

'Package name' is result of a project funded by the Alan Turing Institute. Packagename is a Python library for evaluating synthetic data quality across a wide range of data types (image, tabular, time series, language) and approaches to evaluation. Synthetic data is a crucial part of many machine learning, data science and other applications. The performance of these applications relies on the ‘quality’ and diversity of the synthetic data used. We understand that no clear definition of ‘quality’ (where quality is a measure of how indistinguishable the synthetic data is from the real data) exist in relation to synthetic data. In this package we provide an expanding list of metrics that open sourced and community driven.

The following approaches to evaluation are currently provided:

• Inception Score
• Frechet Inception Distance
• Deep Discriminator
• t-SNE
• PCA followed by
  • IoU
  • DICE

graph LR
A[shallow] -->B[Dimensionality Reduction]
    B --> D[PCA]
    B --> E[t-SNE]
        D & E --> L(Similarity Score)
A --> C[TBC]
F[deep] --> G[Feature Extraction]
    G --> J[SNN]
    G --> K[VAE]
        J & K --> M(Distance)
F --> H[Discriminator]
F --> I[Model Inference]

Using Packagename

Getting Started

Prerequisites

Python 3.8 - 3.10

*We highly recommand that uses the version between 3.8 and 3.10. With these versions, dependencies can be installed properly.

Installation

After cloning the repo into a new directory, make a virtual environment called 'venv', activate it, and install the dependencies using pip tool, e.g.

python3 -m venv venv
source venv/bin/activate
pip install -r requirements.txt

Note: the requirements file contains all the dependencies needed, and it works well when the version of python is in the mentioned range.

Once finished

deactivate

Extracting Metrics

Packagename can be utilised to analysing synthetic image, time-series, tabular and language data with 4 simple steps:

1. Load the Packagename evaluator object
2. Load in your data
3. Create the corresponding datatype evaluator <datatype>_evaluator(data)
4. Call the desired metric evaluator.<metric>()

We handle the rest.

Synthetic Image Evaluator Example

Load in the evaluator object

from synthetic_data_metrics import evaluator

Load in your data as one/two numpy arrays size = [n_samples,H,W,C]:

images, _, _, _ = load_cifar10()

Intialise the image evaluator and feed in your data:

img_evaluator = evaluator.Image_Evaluator(synth, real)

Call your desired metric(s):

img_evaluator.inception_score(n_splits=20)
img_evaluator.dim_reduced_iou_score()
img_evaluator.dim_reduced_dice_score()
img_evaluator.plot_2PC_compare()

Synthetic Time-series Evaluator Example

Load in the evaluator object:

from synthetic_data_metrics import evaluator

Load in your data as two a pandas dataframe with a target column:

real,synth = load_wisdm()

Intialise the image evaluator, feed in your data and supply the target column:

ts_evaluator = evaluator.TS_Evaluator(real,synth,'ACTIVITY')

Call your desired metric(s):

evaluator.discriminative_score()

Contributing:

Packagename is an open source codebase.

Linting

This library uses flake8 for linting. Please identify formatting errors in your code before pushing by running the following

flake8 path/to/file/to/test

Acknowledgements

This work was funded by The Turing Institute.