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Exact Tanimoto Kernel Gaussian Processes

Project description

Tanimoto GP

Work in progress- a small library for Tanimoto kernel GPs.

For a minimal running example, see examples/logp_regression.py.

Development

Installation

Install kern_gp from https://github.com/AustinT/kernel-only-GP.

(currently works with v0.1.0, future compatibility unclear)

Formatting

Use pre-commit to enforce formatting, large file checks, etc.

If not already installed in your environment, run:

conda install pre-commit

To install the precommit hooks:

pre-commit install

Now a series of useful checks will be run before any commit.

List of possible improvements

  • Cache the cholesky factorization of kernel matrix to avoid repeatedly computing this in BO

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