Commandline tools to support proteogenomics analyses at MSK TCDO and beyond
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Commandline tools to support proteogenomics analyses at MSK TCDO and beyond
Free software: Apache Software License 2.0
Documentation: https://tcdo-pg-tools.readthedocs.io.
Features
Merging RNA fusions across multiple samples which were called by CTAT-LR-Fusion or processed using FusionInspector. Currently also needs a metadata sheet from our internal isabl_utils package.
calculation of AA seq coverage across multiple enzymes using fragpipe results
Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
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