A package to simplify common tasks one might perform when interacting with The Cancer Imaging Archive (TCIA) via Jupyter/Python.

Navigation

Verified details

These details have been verified by PyPI
Project links
GitHub Statistics
Maintainers
Avatar for kirbyju from gravatar.com kirbyju

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache Software License
  • Author: Justin Kirby
  • Requires: Python >=3.9
  • Provides-Extra: test
Classifiers
Report project as malware

Project description

Overview

The tcia_utils package contains functions to simplify common tasks one might perform when interacting with The Cancer Imaging Archive (TCIA) via Jupyter/Python. Learn more about TCIA and its open-access datasets at https://www.cancerimagingarchive.net/. Please be sure to comply with the TCIA Data Usage Policy.

Downloads

Installation

pip install tcia_utils

Usage

To import functions related to Wordpress, which holds metadata for TCIA datasets:

from tcia_utils import wordpress

To import functions related to the NBIA software, which holds TCIA's DICOM radiology data:

from tcia_utils import nbia

To import functions related to the PathDB software, which holds TCIA's histopathology data:

from tcia_utils import pathdb

To import functions related to Datacite, which holds information about citations and Digital Object Identifiers (DOIs) for TCIA datasets:

from tcia_utils import datacite

Example notebooks demonstrating tcia_utils functionality can be found at https://github.com/kirbyju/TCIA_Notebooks.

Project details

Verified details

These details have been verified by PyPI
Project links
GitHub Statistics
Maintainers
Avatar for kirbyju from gravatar.com kirbyju

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache Software License
  • Author: Justin Kirby
  • Requires: Python >=3.9
  • Provides-Extra: test
Classifiers

Release history Release notifications | RSS feed

3.3.4

This version

3.3.3

3.3.2

3.3.1

3.3.0

3.2.1

3.2.0

3.1.2

3.1.1

3.1.0

3.0.4

3.0.3

3.0.2

3.0.1

3.0.0

2.4.20

2.4.19

2.4.18

2.4.17

2.4.16

2.4.15

2.4.14

2.4.13

2.4.12

2.4.11

2.4.10

2.4.9

2.4.8

2.4.7

2.4.6

2.4.5

2.4.4

2.4.3

2.4.1

2.4.0

2.3.3

2.3.2

2.3.1

2.3.0

2.2.1

2.2.0 yanked

Reason this release was yanked:

Introduced bugs that need to be resolved

2.1.16 yanked

Reason this release was yanked:

Introduced bugs that need to be resolved

2.1.15

2.1.14

2.1.13

2.1.12

2.1.11

2.1.10

2.1.9

2.1.8

2.1.7

2.1.6

2.1.5

2.1.4

2.1.3

2.1.2

2.1.1

2.1.0

2.0.1

2.0

1.8.2

1.8.1

1.8

1.7.4

1.7.3

1.7.2

1.7.1

1.7.0

1.6.9

1.6.8

1.6.7

1.6.6

1.6.5

1.6.4

1.6.3

1.6.2

1.6.1

1.6

1.5.1

1.5

1.4.1

1.4

1.3.2

1.3.1

1.3.0

1.2.0

1.1.1

1.1.0

1.0.2

1.0.1

1.0.0

0.0.5

0.0.4 yanked

Reason this release was yanked:

bug fix

0.0.3 yanked

0.0.2 yanked

Reason this release was yanked:

filename conflict

0.0.1 yanked

Reason this release was yanked:

dependency errors

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

tcia_utils-3.3.3.tar.gz (50.3 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

tcia_utils-3.3.3-py3-none-any.whl (48.5 kB view details)

Uploaded Python 3

File details

Details for the file tcia_utils-3.3.3.tar.gz.

File metadata

  • Download URL: tcia_utils-3.3.3.tar.gz
  • Upload date:
  • Size: 50.3 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.12

File hashes

Hashes for tcia_utils-3.3.3.tar.gz
Algorithm Hash digest
SHA256 b52cad377e50630b5c18396853e4f6c93f6ea70b4f76444e13948aebe4b92ed0
MD5 b03753430bf104b5671ece2421a498d2
BLAKE2b-256 cf5579e5835b4ce2a02b899e174cdcaf0a33e4b927379703a27186e46eea97cc

See more details on using hashes here.

Provenance

The following attestation bundles were made for tcia_utils-3.3.3.tar.gz:

Publisher: publish.yml on kirbyju/tcia_utils

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file tcia_utils-3.3.3-py3-none-any.whl.

File metadata

  • Download URL: tcia_utils-3.3.3-py3-none-any.whl
  • Upload date:
  • Size: 48.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.12

File hashes

Hashes for tcia_utils-3.3.3-py3-none-any.whl
Algorithm Hash digest
SHA256 4f4dbdbdc407f955a03766ea76ac9ade006f5fbbe3cd6a2091794025543fed3f
MD5 22f3d3b6bf8720684237e2be300eca27
BLAKE2b-256 86ab1d7c8d89f6eb6327c84e7696f42ba568172d183137612d10d09979c7d0c3

See more details on using hashes here.

Provenance

The following attestation bundles were made for tcia_utils-3.3.3-py3-none-any.whl:

Publisher: publish.yml on kirbyju/tcia_utils

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page