Skip to main content

Telomere Computational Analysis Tool

Project description

Hello and thank you for choosing the Telomerecat (Telomere Computational Analysis Tool). Telomerecat is a tool for estimating the average telomere length (TL) for a paired end, whole genome sequencing (WGS) sample.

Telomerecat is adaptable, accurate and fast. The algorithm accounts for sequencing amplification artifacts, anneouploidy (common in cancer samples) and noise generated by WGS. For a high coverage WGS BAM file of around 100GB telomerecat can produce an estimate in ~1 hour.

A full manual for Telomerecat is available at: telomerecat.readthedocs.org

Contact Henry Farmery (jhrf2@cam.ac.uk) for support regarding this tool.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

telomerecat-1.4.tar.gz (25.4 MB view details)

Uploaded Source

File details

Details for the file telomerecat-1.4.tar.gz.

File metadata

  • Download URL: telomerecat-1.4.tar.gz
  • Upload date:
  • Size: 25.4 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No

File hashes

Hashes for telomerecat-1.4.tar.gz
Algorithm Hash digest
SHA256 7400bedb82369eb32259261e9de176cc2f82f99f8af2b07934deb0e356e15e01
MD5 81b7db1d3f99b26f6856f032d6a12cb6
BLAKE2b-256 2577af09e33e370301e92c9354c84aeb9cd76b6c81ca7bfe26599f41f7f70e6d

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page