tensorblob
A lightweight, dynamic-sized, memory-mapped tensor storage with file-like APIs, while also supporting integer indexing and slicing, built with MemoryMappedTensor from tensordict.
Features
- 🔗 Memory-mapped storage: Efficient storage of large collections of same-shaped tensors
- 💾 File-like APIs: Read, write, and seek like a file, while also supporting integer indexing and slicing
- ⚡ Dynamic-sized: No need to specify the total number of tensors upfront
- 🔄 Extend and truncate: Extend the blob with another blob or truncate the blob to a specific position
- 🚀 LRU cache: Automatic management of memory-mapped blocks for scalability with large blobs
- 🧩 Multi-field databases:
TensorDBmanages several row-aligned blobs for heterogeneous data, e.g., multivariate time series or event streams
Installation
From PyPI:
pip install tensorblob
If you are interested in the experimental (i.e., unstable and undertested) version, you can install it from GitHub:
pip install git+https://github.com/Guest400123064/tensorblob.git
Core Use Cases
Quick Start
The example below shows how to create a new storage for a collection of randomly generated fake embeddings, and how to access them by index. Since the storage is memory-mapped, no need to read all tensors into memory; just access them by index.
import torch
from tensorblob import TensorBlob
# Create a new storage for a collection of randomly generated fake embeddings;
# need to specify the data type and shape of each tensor for creation
with TensorBlob.open("embeddings.blob", "w", dtype="float32", shape=768) as blob:
blob.write(torch.randn(100_000, 768))
print(f"Wrote {len(blob)} embeddings")
# No need to specify the configurations again after creation
with TensorBlob.open("embeddings.blob", "r") as blob:
e1 = blob[42]
e2 = blob[-1:16384:-12345]
print(f"Similarity: {torch.cosine_similarity(e1, e2)}")
Processing Large Datasets
Store and preprocess datasets larger than RAM using memory mapping can be useful to accelerate the training process by reducing the time spent on data loading and transformation.
with TensorBlob.open("data/images.blob", "w", dtype="float32", shape=(3, 224, 224)) as blob:
for image_batch in data_loader:
blob.write(preprocess(image_batch))
with TensorBlob.open("data/images.blob", "r") as blob:
for image in blob:
result = model(image)
Incremental Data Collection
Append new data to existing blobs can be useful with streaming data collection.
with TensorBlob.open("positions.blob", "w", dtype="float32", shape=3) as blob:
blob.write(initial_position)
# Later: append more data by opening the blob in append mode
with TensorBlob.open("positions.blob", "a") as blob:
for pos in trajectory_queue.get():
blob.write(pos)
print(f"Total trajectory recorded: {len(blob)}")
Random Access and Updates with File-Like APIs
Read and modify specific tensors starting from a specific position.
import io
with TensorBlob.open("data/features.blob", "r+") as blob:
blob.seek(1000)
print(f"Current position: {blob.tell()}")
batch = blob.read(size=100)
print(f"Read {batch.shape} tensors")
# Update specific positions, whence is also supported
blob.seek(-500, whence=io.SEEK_END)
blob.write(updated_features)
# Append new data
blob.seek(len(blob))
blob.write(additional_features)
Extend and Truncate
Extend the blob with another blob or truncate the blob to a specific position. Extension could be useful if we want to merge two blobs into one, e.g., results from two different processes. Note that extension operation does not delete the original data.
with TensorBlob.open("data/features.blob", "a") as blob:
blob.extend(other_blob)
# Extension without maintaining the order is faster
with TensorBlob.open("data/features.blob", "r+") as blob:
blob.extend(other_blob, maintain_order=False)
with TensorBlob.open("data/features.blob", "r+") as blob:
blob.truncate(1000)
print(f"Truncated to {len(blob)} tensors")
Heterogeneous Data with TensorDB
For multi-modal or multi-field data (e.g., multivariate time series, event streams), TensorDB manages several TensorBlobs under the hood — one per field — with row orders always aligned. Each field has its own dtype and shape, and each field's storage gets its own independent LRU cache and block files.
from tensorblob import TensorDB
# Create a database with a fixed schema mapping field names to (dtype, shape)
with TensorDB.open("events.db", "w",
schema={"price": ("float32", 1),
"embed": ("float16", 768)}) as db:
# Rows are dense: every write must supply every field with the same row count
db.write({"price": torch.randn(100_000, 1),
"embed": torch.randn(100_000, 768).half()})
print(f"Wrote {len(db)} rows")
# No need to specify the schema again after creation
with TensorDB.open("events.db", "r") as db:
row = db[42] # {"price": tensor of shape (1,), "embed": (768,)}
batch = db[10:100] # {"price": (90, 1), "embed": (90, 768)}
print(f"Fields: {list(batch)}, price range: {batch['price'].min()}..{batch['price'].max()}")
TensorDB supports the same file-like APIs as TensorBlob, applied row-wise across all fields:
with TensorDB.open("events.db", "r+") as db:
db.seek(1000)
batch = db.read(size=100) # dict of (100, ...) tensors
db.seek(-500, whence=io.SEEK_END)
db.write({"price": new_prices, "embed": new_embeds}) # overwrite in place
db.truncate(10_000) # truncate all fields at once
db.extend(other_db, maintain_order=False) # merge another db with the same schema
# Cleanup removes the whole database directory
TensorDB.unlink("events.db")
Consistency guarantee: a write commits the row count only after all fields are written. If a crash interrupts a write mid-way, the next open reports the last committed (fully written) row count, and writable opens automatically truncate the stray partial rows, so row alignment is always preserved.
Performance and Scalability
Memory Management
TensorBlob uses an LRU (Least Recently Used) cache to manage memory-mapped blocks efficiently. This allows you to work with blobs containing millions of tensors without loading everything into memory.
Default behavior:
- Automatically caches up to ~4,000 blocks (1/16 of system's VMA limit)
- Blocks loaded on-demand when accessed
- Least recently used blocks automatically evicted when cache is full
For large-scale workloads:
# Increase cache for better random access performance
with TensorBlob.open("large.blob", "r", max_cached_blocks=10_000) as blob:
for idx in random_indices:
tensor = blob[idx] # Cached blocks reused efficiently
# Decrease cache for memory-constrained environments
with TensorBlob.open("data.blob", "r", max_cached_blocks=100) as blob:
for tensor in blob: # Sequential access works fine with small cache
process(tensor)
Performance tips:
- Sequential access patterns work well with any cache size
- Random access benefits from larger cache sizes — but do not undersize the cache for random workloads: when the random working set exceeds
max_cached_blocks, every access evicts and remaps a block, degrading lookup latency several-fold (~30 µs → ~140 µs in our benchmarks). If in doubt, increase the cache or the block size - Each cached block consumes ~200 bytes of kernel memory (VMA overhead)
- System limit: typically ~65,000 memory-mapped regions per process
- To avoid frequent cache evictions, one can also increase the block size to reduce the total number of blocks
- For random batches, use vectorized batch indexing
blob[idxs](list, tuple, or 1-D torch.Tensor of row indices) instead of gathering row by row — it is ~7x faster; contiguous slices are faster still, so pre-sorting indices helps when order is flexible
Benchmarks
Headline numbers from the synthetic benchmark suite (500k × 768-dim float32 rows, 12-core x86_64, 16 GiB RAM; see benchmarks/ for full analysis and reproducible scripts):
| Measurement | Result |
|---|---|
| Sequential write throughput | ~165 MB/s (~54k rows/s) |
| Sequential read throughput | ~2.2 GB/s (~730k rows/s), vs ~7.2 GB/s in-memory upper bound |
| Random single-row lookup | ~31 µs median (in-memory: ~5 µs) |
| Preprocessing offload (5 epochs) | ~3.5x faster than re-preprocessing; breaks even after ~1.2 epochs |
| Memory footprint | bounded by max_cached_blocks; +16 VMAs / +1.3 MiB RSS at cache size 16 |
| TensorDB column projection | reading one cheap field only is ~6x cheaper than full-row reads |
Contributing
Contributions welcome! Please submit a Pull Request.
License
Apache License 2.0 - see LICENSE file for details.
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