tensors-data-class 0.0.1

PyTorch Extension Library for organizing tensors in a form of a structured tree of dataclasses, with built-in support for advanced collating mechanisms

TensorsDataClass

PyTorch Extension Library for organizing tensors in a form of a structured tree of dataclasses, with built-in support for advanced collating mechanisms. The batch creation process seamlessly solves issues like: sequences padding, un/flattening variable #objects per example into a single batch dimension, fixing within-example indices to be batch-based indices, auto-creation of sequences & collate masks, and more.

What pains TensorsDataClass aims to solve

... variable number of sequences per example where the sequence lengths may also be variable; lots of inputs usually gets messy - hard to handle, to name, to move to GPU, to abstract in a (X,Y) fashion ...

Installation

pip install tensors-data-class

Usage example

# TODO: simplify the below example. still use these:
#   BatchFlattenedSeq, BatchFlattenedTensor,
#   BatchedFlattenedIndicesFlattenedTensor,
#   BatchedFlattenedIndicesFlattenedSeq,
#   BatchedFlattenedIndicesPseudoRandomPermutationBatchedFlattenedIndicesPseudoRandomPermutation,
#   BatchFlattenedPseudoRandomSamplerFromRange

from tensors_data_class import *

@dataclasses.dataclass
class CodeExpressionTokensSequenceInputTensors(TensorsDataClass):
    token_type: BatchFlattenedSeq  # (nr_expressions_in_batch, batch_max_nr_tokens_in_expr)
    kos_token_index: BatchFlattenedTensor  # (nr_kos_tokens_in_all_expressions_in_batch,)
    identifier_index: BatchedFlattenedIndicesFlattenedTensor  # (nr_identifier_tokens_in_all_expressions_in_batch,)


@dataclasses.dataclass
class SymbolsInputTensors(TensorsDataClass):
    symbols_identifier_indices: BatchedFlattenedIndicesFlattenedTensor  # (nr_symbols_in_batch,);  value meaning: identifier batched index
    symbols_appearances_symbol_idx: BatchedFlattenedIndicesFlattenedTensor  # (nr_symbols_appearances,);
    symbols_appearances_expression_token_idx: BatchFlattenedTensor = None  # (nr_symbols_appearances,);
    symbols_appearances_cfg_expression_idx: BatchedFlattenedIndicesFlattenedTensor = None  # (nr_symbols_appearances,);


@dataclasses.dataclass
class CFGPathsInputTensors(TensorsDataClass):
    nodes_indices: BatchedFlattenedIndicesFlattenedSeq
    edges_types: BatchFlattenedSeq


@dataclasses.dataclass
class CFGPathsNGramsInputTensors(TensorsDataClass):
    nodes_indices: BatchedFlattenedIndicesFlattenedSeq
    edges_types: BatchFlattenedSeq


@dataclasses.dataclass
class PDGInputTensors(TensorsDataClass):
    cfg_nodes_control_kind: Optional[BatchFlattenedTensor] = None  # (nr_cfg_nodes_in_batch, )
    cfg_nodes_has_expression_mask: Optional[BatchFlattenedTensor] = None  # (nr_cfg_nodes_in_batch, )
    cfg_nodes_tokenized_expressions: Optional[CodeExpressionTokensSequenceInputTensors] = None
    cfg_nodes_random_permutation: Optional[BatchedFlattenedIndicesPseudoRandomPermutation] = None
    cfg_control_flow_paths: Optional[CFGPathsInputTensors] = None
    cfg_control_flow_paths_ngrams: Optional[Dict[int, CFGPathsNGramsInputTensors]] = None


@dataclasses.dataclass
class IdentifiersInputTensors(TensorsDataClass):
    sub_parts_batch: BatchFlattenedTensor  # (nr_sub_parts_in_batch, )
    identifier_sub_parts_index: BatchedFlattenedIndicesFlattenedSeq  # (nr_identifiers_in_batch, batch_max_nr_sub_parts_in_identifier)
    identifier_sub_parts_vocab_word_index: BatchFlattenedSeq  # (nr_identifiers_in_batch, batch_max_nr_sub_parts_in_identifier)
    identifier_sub_parts_hashings: BatchFlattenedSeq  # (nr_identifiers_in_batch, batch_max_nr_sub_parts_in_identifier, nr_hashing_features)
    sub_parts_obfuscation: BatchFlattenedPseudoRandomSamplerFromRange  # (nr_sub_parts_obfuscation_embeddings)


@dataclasses.dataclass
class MethodCodeInputTensors(TensorsDataClass):
    example_hash: str
    identifiers: IdentifiersInputTensors
    symbols: SymbolsInputTensors
    method_tokenized_code: Optional[CodeExpressionTokensSequenceInputTensors] = None
    pdg: Optional[PDGInputTensors] = None

example1 = MethodCodeInputTensors(...)  # TODO: fill example data
example2 = MethodCodeInputTensors(...)  # TODO: fill example data
batch = MethodCodeInputTensors.collate([example1, example2])
print(batch)
# TODO: add example for creating a padded-sequence (after applying embedding on the input), unflattening. 

Different types for different use-cases

TensorsDataClass

BatchFlattenedTensor

BatchFlattenedSeq

BatchedFlattenedIndicesFlattenedTensor

BatchedFlattenedIndicesFlattenedSeq

BatchedFlattenedIndicesPseudoRandomPermutationBatchedFlattenedIndicesPseudoRandomPermutation

BatchFlattenedPseudoRandomSamplerFromRange