The Curator helps you define pipelines for transforming dirty data into consumable databases.
Usage
from thecurator import Curator
# Paths to files describing different tables
table_descriptions = ['patient.yml', 'lab.yml']
curator = Curator(sqlalchemy_engine, table_descriptions)
# Transform a pandas DataFrame according to the descriptions
curator.transform_df('patient', patient_df)
# Transform a dictionary array according to the descriptions
curator.transform_dicts('patient', patient_dicts)
# Transform and insert a dictionary array according to the descriptions
curator.insert_dicts('lab', lab_dicts)See the tests for more examples. More coming soon…
Development
Install development requirements pip install -r dev-requirements.txt
Make changes
Run the tests pytest tests
See the Makefile for other useful commands
1 maintainer
Metadata
1 maintainer
Release files for thecurator 0.2.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
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| thecurator-0.2.1.tar.gz | 5.7 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| thecurator-0.2.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 12.9 kB
Release files / thecurator-0.2.1.tar.gz
| Download URL | thecurator-0.2.1.tar.gz |
|---|---|
| Size | 5.7 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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Release files / thecurator-0.2.1-py3-none-any.whl
| Download URL | thecurator-0.2.1-py3-none-any.whl |
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| Size | 7.2 kB |
| Tags | Python 3 |
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