wsi_til

Tumor-infiltrating lymphocytes prediction based on Whole Slide Imaging.

Installation

The tools uses Tensorflow v.1 and thats why requires Python 3.7 to be installed. If you have Python below 3.7.12 already installed please simply run:

pip install tily

If you also need to install Python 3.7 please run the following:

sudo make install
python3.7 -m pip install tily

To start the validation run the following:

tily --input_tiff=<PATH TO TIF\SVS file>

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution for tily 0.0.8
File	Size	Uploaded
tily-0.0.8.tar.gz	11.9 kB	Dec 10, 2021	Details

Table of built distributions (wheels) for tily 0.0.8
File	Interpreter	ABI	Platform	Reset
tily-0.0.8-py3-none-any.whl 12.9 kB Dec 10, 2021	Python 3	none	any	Details

Total release size: 24.9 kB

Download URL	tily-0.0.8.tar.gz
Size	11.9 kB
Tags	Source
SHA-256 checksum How to use checksums	`7cc745d8ddde0ad77d94f45517b1f31e33b99bea841bb03b8f6c2aa4852b87ca`
BLAKE2b-256 checksum How to use checksums	`3907f080405d0331f2100a8a8cd752e3b6ce47b878ca11faba5fc9abbd025699`
Upload date	Dec 10, 2021
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.7.1 importlib_metadata/4.8.2 pkginfo/1.8.2 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.9`

Download URL	tily-0.0.8-py3-none-any.whl
Size	12.9 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`12a07c59250b159595da753cab19c7b3477c12558acf586ed38c81e47b92546e`
BLAKE2b-256 checksum How to use checksums	`264096c3d3da685561072d662b4a5c59ab15e5009f2365230d72180a12fbdf39`
Upload date	Dec 10, 2021
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.7.1 importlib_metadata/4.8.2 pkginfo/1.8.2 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.9`