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Topica: fast, all-purpose topic modeling for Python — a Rust core for LDA, STM, and more

Project description

Topica: fast, all-purpose topic modeling for Python

PyPI CI Docs License: Apache-2.0

topica is a fast topic-modeling library for Python with more than a dozen models, built for social scientists who want to move from text data to publishable results in a single workflow. It brings together models and tools usually split across JVM software like MALLET and R packages like stm, and runs them on a parallel Rust core competitive with the standard implementations, with reproducible fits: the variational models are identical to the bit, and the samplers reproduce from a fixed seed and thread count. Each model comes with the validation, covariate-effect, and reporting tools to meet the standards reviewers expect.

pip install topica

The core needs only NumPy. Optional extras add features without weighing the core down: topica[viz] (matplotlib plots), topica[formula] (R-style formulas), topica[polars] (Polars frames), and topica[llm] (LLM labels and embeddings, OpenAI or local via ollama). PyTorch is never required.

from topica import LDA

model = LDA(num_topics=2, seed=42)
model.fit([["cat", "dog", "fish"]] * 15 + [["planet", "star", "moon"]] * 15, iters=1000)

for i, words in enumerate(model.top_words(3)):
    print(f"Topic {i}:", " ".join(w for w, _ in words))

See the getting-started guide and the worked examples for end-to-end analyses.

Models

Models are organized by what you bring and what you want, not by inference family. The from topica import X namespace is flat; topica.list_models(group=…, brings=…, inference=…, determinism=…) filters this roster in code. Brings is what you supply beyond raw text; Reproducibility is bit-exact (identical regardless of thread count), seed-reproducible (identical from a fixed seed and thread count), or llm-bounded.

General-purpose

Model Brings Inference Reproducibility Summary
LDA text gibbs seed-reproducible Classic latent Dirichlet allocation via a fast SparseLDA collapsed-Gibbs sampler.
CTM text variational bit-exact Correlated topic model: a logistic-normal prior that lets topics co-occur.
ProdLDA text vae seed-reproducible Product-of-experts LDA (AVITM) for sharper, more coherent topics; hand-coded VAE.
HDP text gibbs seed-reproducible Hierarchical Dirichlet process: infers the number of topics from the data.
NMF text matrix-factorization bit-exact Non-negative matrix factorization of the document-term matrix via multiplicative updates.
LSA text svd bit-exact Latent semantic analysis: a truncated SVD of the weighted document-term matrix.

Covariates & structure

Model Brings Inference Reproducibility Summary
STM text, metadata variational bit-exact Structural topic model: relate topic prevalence and content to covariates.
STS text, metadata variational bit-exact Structural topic-and-sentiment model over document metadata.
SAGE text, metadata gibbs seed-reproducible Sparse additive generative model: the same topic worded differently across groups.
DMR text, metadata gibbs seed-reproducible Dirichlet-multinomial regression: a document-metadata prior on topic proportions.
GDMR text, metadata gibbs seed-reproducible Generalized DMR with a smooth (Legendre-basis) prior over continuous covariates.

Guided & supervised

Model Brings Inference Reproducibility Summary
KeyATM text, seeds gibbs seed-reproducible Keyword-assisted topics: anchor named topics with a few seed words each.
SeededLDA text, seeds gibbs seed-reproducible Seeded LDA: steer named topics toward supplied seed words.
LabeledLDA text, labels gibbs seed-reproducible Labeled LDA: each document label is a topic; tokens are restricted to its labels.
SupervisedLDA text, labels gibbs seed-reproducible Supervised LDA: topics shaped to predict a per-document real-valued response.

Short text

Model Brings Inference Reproducibility Summary
GSDMM text gibbs seed-reproducible Gibbs-sampling Dirichlet mixture: one topic per short document.
PT text gibbs seed-reproducible Pseudo-document topic model: pool short texts into pseudo-documents.

Dynamic & hierarchical

Model Brings Inference Reproducibility Summary
DTM text, times variational bit-exact Dynamic topic model: a fixed topic set whose word distributions drift across time slices.
DETM text, embeddings, times vae seed-reproducible Dynamic embedded topic model: embedding-factored topics that drift across time slices, fit as an amortized VAE.
HLDA text gibbs seed-reproducible Hierarchical LDA (nested CRP): a learned tree of super- and sub-topics.
PA text gibbs seed-reproducible Pachinko allocation: a DAG of super- and sub-topics.

Embedding-based

Model Brings Inference Reproducibility Summary
BERTopic text, embeddings clustering seed-reproducible Cluster document embeddings; label topics by class-based TF-IDF.
Top2Vec text, embeddings clustering seed-reproducible Topics as dense regions in a joint document-word embedding space.
ETM text, embeddings variational bit-exact Embedded topic model: topic-word distributions factored through word embeddings.
FASTopic text, embeddings optimal-transport bit-exact Topics from optimal-transport plans between document, topic, and word embeddings.
EmbeddingLDA text, embeddings, seeds gibbs seed-reproducible Seeded LDA whose seed sets are expanded with nearest neighbors in an embedding space.
CombinedTM text, embeddings vae bit-exact Contextualized ProdLDA: encoder reads the bag of words plus a document embedding.
ZeroShotTM text, embeddings vae bit-exact Contextualized ProdLDA: encoder reads the document embedding alone, enabling cross-lingual transfer.

LLM-based

Model Brings Inference Reproducibility Summary
TopicGPT text, llm prompting llm-bounded LLM-driven topic discovery: prompt a model to propose, refine, and assign a topic taxonomy with descriptions.

Every model exposes the same shape: fit(docs, …), then topic_word (φ), doc_topic (θ), top_words(n), and save/load, so one diagnostic, labeling, and effect-estimation stack applies to all of them and a new model inherits it for free. The embedding-based models take document vectors from any embedder (sentence-transformers, an API, or a local model such as ollama; no PyTorch or UMAP/numba in the wheel). Full guides: the models and embedding topics.

Diagnostics & analysis

Model-agnostic: they work on any fitted model's topic_word/doc_topic:

  • Quality: coherence (u_mass, c_v, c_uci, c_npmi; co-occurrence counting in the Rust core), exclusivity, topic_diversity, quality_frontier
  • Labeling: label_topics (prob / FREX / lift / score), frex, relevance, find_thoughts, topic_table, summary
  • Validation: word_intrusion, document_intrusion, bootstrap_stability, search_k
  • Reliability: select_model (fit many seeds) and ensemble (combine runs into a consensus more reliable than any single fit — cluster/align/stable methods, the last a gensim EnsembleLda port)
  • Comparison: fighting_words (weighted log-odds) for contrasting corpora
  • Covariate effects: estimate_effect (method of composition, cluster-robust SEs, GLM links), topic_correlation, and the design helpers one_hot, spline, and interaction (all top level; they build covariate bases for any model's design matrix); posterior_theta_samples draws θ for the logistic-normal models (STM/CTM)
  • Preprocessing: tokenize, learn_phrases / apply_phrases, split_documents, the Corpus class

See diagnostics and covariate effects.

Performance

topica runs on a parallel Rust core. It is several times faster than R stm — the single-threaded field standard — for the structural and other variational models, and it matches the hand-tuned compiled samplers core for core: parity with Java MALLET on plain LDA and with the C++ keyATM on keyword models. On the political-blog corpus (2,000 documents, fit time only, same iterations on both sides):

Model Reference topica speedup
STM R stm 4–10× single-threaded, ~11–32× multithreaded
LDA Java MALLET parity single-threaded; multithread speedup grows with corpus size
keyATM R keyATM parity single-threaded, ~2× multithreaded

For the approximate parallel Gibbs samplers the multithreaded speedup grows with corpus size: the per-sweep count-table merge is fixed overhead, so larger corpora amortize it over more sampling work. LDA's eight-core speedup over MALLET runs about 3× at 2,000 documents and reaches ~4× at 5,000, so the small-corpus figures above understate what large-corpus users see.

Every fit is reproducible from a fixed seed and validated against its reference. See Benchmarks for the full methodology; reproduce the 2,000-document table with python benchmarks/speed_vs_r.py and the size-varying curve with python benchmarks/speed_vs_size.py.

Install from source

pip install maturin
git clone https://github.com/nealcaren/topica && cd topica
python -m venv .venv && source .venv/bin/activate
maturin develop --release --features python

Requires numpy >= 1.21. Use --release (the debug build is much slower).

Acknowledgements

Topica stands on a generation of open topic-modeling research and code. Each entry below lists the reference, its authors and year, and the topica class(es) it underlies; the other models are Rust ports or reimplementations, validated against these reference implementations.

  • MALLET (McCallum, 2002) — LDA, DMR, LabeledLDA: the SparseLDA sampler, Dirichlet-multinomial regression, and hyperparameter optimization. LDA began as a port of David Mimno's RustMallet (Apache-2.0) and follows its SparseLDA sampler and fixed-point optimizer closely, but uses its own RNG (PCG), so it is not byte-identical to RustMallet. Against Java MALLET (also a different RNG) it recovers the same topics on a planted corpus (cosine 1.000)
  • stm (Roberts, Stewart & Tingley, 2019) — STM, CTM, SAGE: variational EM, estimateEffect, searchK, FREX, spectral initialization, and the method of composition
  • sts (Chen & Mankad, 2024) — STS: the Structural Topic and Sentiment-Discourse model — the joint prevalence/sentiment Laplace E-step and the Poisson topic-word M-step, validated against the package
  • lda-c / ctm-c / dtm and hdp (Blei lab, 2006–2007) — CTM, DTM, HDP: the CTM, Dynamic Topic Model, and HDP samplers
  • gensim (Řehůřek & Sojka, 2010) — DTM, ensemble: the coherence-pipeline conventions (the coherence_type= API and default sliding windows; the measures themselves are Röder et al. 2015 and Mimno et al. 2011), the LdaSeqModel DTM reference, and the EnsembleLda (CBDBSCAN stable-topic) method ported for ensemble(method="stable")
  • tomotopy (bab2min, 2020) — API conventions (summary, the short-text models), and GDMR (generalized DMR; Lee & Song, 2020), validated against its GDMRModel
  • scikit-learn (Pedregosa et al., 2011) — NMF: the multiplicative-update solver (Lee & Seung, 2001) and the NNDSVD initialization (Boutsidis & Gallopoulos, 2008), validated against sklearn.decomposition.NMF (BSD-3-Clause); and LSA: latent semantic analysis / indexing (Deerwester et al., 1990), validated against sklearn.decomposition.TruncatedSVD (BSD-3-Clause) including its svd_flip sign convention. The numerics are reimplemented in Rust; the randomized truncated SVD shared by both (it seeds NMF's NNDSVD and is the LSA factorization itself) follows Halko et al. (2011).
  • keyATM (Eshima, Imai & Sasaki, 2024) — KeyATM: the base, covariate, and dynamic models, the information-theory token weighting, and the Chib (1998) change-point HMM, validated against the package
  • seededlda (Watanabe, 2023) — SeededLDA: the seeded-prior scheme
  • LightLDA (Yuan et al., 2015) — LDA: the alias-table Metropolis-Hastings sampler
  • GSDMM (Yin & Wang, 2014) — GSDMM: the movie-group-process mixture for short text
  • ProdLDA / AVITM (Srivastava & Sutton, 2017) — ProdLDA: autoencoding variational inference and the product-of-experts word model
  • BERTopic (Grootendorst, 2022) and Top2Vec (Angelov, 2020) — BERTopic, Top2Vec: the embedding-clustering pipeline, class-based TF-IDF, and the reduce → cluster → represent design
  • ETM (Dieng, Ruiz & Blei, 2020) — ETM: the Embedded Topic Model (per-document variational EM and an amortized VAE)
  • DETM (Dieng, Ruiz & Blei, 2019) — DETM: the Dynamic Embedded Topic Model (structured amortized variational inference with a hand-coded LSTM)
  • FASTopic (Wu et al., 2024) — FASTopic: the optimal-transport topic model
  • contextualized-topic-models (Bianchi et al., MIT) — CombinedTM (Bianchi, Terragni & Hovy, 2021) and ZeroShotTM (Bianchi, Nozza & Hovy, 2021): ProdLDA encoders that read a contextual document embedding, alongside or in place of the bag of words
  • CLNTM (Nguyen & Luu, 2021) — the InfoNCE contrastive regularization on topic vectors offered by the contrastive= flag on the VAE models
  • WHAI / Weibull-Dirichlet VAE (Zhang et al., 2018; Burkhardt & Kramer, 2019) — the Weibull-reparameterized Dirichlet prior offered by prior="dirichlet" on the VAE models
  • Neural variational topic models with alternative priors (Miao, Grefenstette & Blunsom, 2017; Nalisnick & Smyth, 2017) — the Gaussian stick-breaking prior offered by prior="stick_breaking" on the VAE models
  • TopicGPT (Pham et al., NAACL 2024, MIT) — TopicGPT: the generate / refine / assign prompt flow for LLM-driven topic discovery

The embedding-native models build on two pure-Rust crates: petal-clustering for HDBSCAN and umap-rs for the optional UMAP reducer, both BLAS-free.

Full citations for every model and reference implementation, and how to cite topica, are on the Citing page.

License

Apache-2.0 — see LICENSE.

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