topomics
Single-cell multiomics topic modeling
Getting started
Please refer to the documentation, in particular, the API documentation.
Installation
You need to have Python 3.10 or newer installed on your system. If you don't have Python installed, we recommend installing uv.
There are several alternative options to install topomics:
- Install the latest development version:
pip install git+https://github.com/fcaretti/topomics.git@main
Or even better, download, activate your environment, enter the repo and then run
pip install -e .'[spatial, amortized, test, docs]'
or a subset of these if you prefer a lighter installation.
Suggest changes
For now, simply add points or subpoints to ROADMAP.md.
Release notes
See the changelog.
Contact
For questions and help requests, you can reach out. If you found a bug, please use the issue tracker.
Citation
t.b.a
1 maintainer
Metadata
1 maintainer
Release files for topomics 0.0.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| topomics-0.0.1.tar.gz | 16.2 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| topomics-0.0.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 16.3 MB
Release files / topomics-0.0.1.tar.gz
| Download URL | topomics-0.0.1.tar.gz |
|---|---|
| Size | 16.2 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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Transparency logRelease files / topomics-0.0.1-py3-none-any.whl
| Download URL | topomics-0.0.1-py3-none-any.whl |
|---|---|
| Size | 92.1 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.12
|
Provenance
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PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
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