A library for computing topological data structures stemming from Morse Theory. Given a set of arbitrarily arranged points in any dimension, this library is able to construct approximate topological structures using a neighborhood graph to simulate manifold structures.
Installation
Currently, you can use pip to install this package and all of its prerequisite libraries:
pip install topopy
Or to install from source, install all of the prerequiste libraries:
And then clone and build the source repository:
git clone https://github.com/maljovec/topopy.git cd topopy make python setup.py [develop|install]
Example Usage
import nglpy as ngl
import numpy as np
import topopy
def hill(_x):
_x = np.atleast_2d(_x)
x = _x[:, 0]
y = _x[:, 1]
return np.exp(- ((x - .55)**2 + (y-.75)**2)/.125) + 0.01*(x+y)
X = np.random.rand(100,2)
Y = hill(X)
graph = ngl.EmptyRegionGraph(beta=1.0, relaxed=False, p=2.0)
msc = topopy.MorseSmaleComplex(graph=graph,
gradient='steepest',
normalization='feature')
msc.build(X, Y)
msc.get_partitions()
1 maintainer
Metadata
1 maintainer
Release files for topopy 1.0.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| topopy-1.0.4.tar.gz | 399.4 kB | Details |
Built distributions (wheels)
Total release size: 75.8 MB
Release files / topopy-1.0.4.tar.gz
| Download URL | topopy-1.0.4.tar.gz |
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| Size | 399.4 kB |
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| Download URL | topopy-1.0.4-pp39-pypy39_pp73-win_amd64.whl |
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| Size | 257.9 kB |
| Tags | PyPy 3.9 PyPy 3.9 7.3 Windows x86-64 |
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| Download URL | topopy-1.0.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 371.5 kB |
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| Download URL | topopy-1.0.4-pp39-pypy39_pp73-manylinux_2_17_i686.manylinux2014_i686.whl |
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| Download URL | topopy-1.0.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp39-cp39-win_amd64.whl
| Download URL | topopy-1.0.4-cp39-cp39-win_amd64.whl |
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Release files / topopy-1.0.4-cp39-cp39-win32.whl
| Download URL | topopy-1.0.4-cp39-cp39-win32.whl |
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Release files / topopy-1.0.4-cp39-cp39-musllinux_1_1_x86_64.whl
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Release files / topopy-1.0.4-cp39-cp39-musllinux_1_1_i686.whl
| Download URL | topopy-1.0.4-cp39-cp39-musllinux_1_1_i686.whl |
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Release files / topopy-1.0.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp39-cp39-manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | topopy-1.0.4-cp39-cp39-manylinux_2_17_i686.manylinux2014_i686.whl |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp39-cp39-macosx_10_9_x86_64.whl
| Download URL | topopy-1.0.4-cp39-cp39-macosx_10_9_x86_64.whl |
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No |
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Release files / topopy-1.0.4-cp38-cp38-win_amd64.whl
| Download URL | topopy-1.0.4-cp38-cp38-win_amd64.whl |
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No |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp38-cp38-win32.whl
| Download URL | topopy-1.0.4-cp38-cp38-win32.whl |
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Release files / topopy-1.0.4-cp38-cp38-musllinux_1_1_x86_64.whl
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp38-cp38-musllinux_1_1_i686.whl
| Download URL | topopy-1.0.4-cp38-cp38-musllinux_1_1_i686.whl |
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| Size | 3.6 MB |
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Release files / topopy-1.0.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp38-cp38-manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | topopy-1.0.4-cp38-cp38-manylinux_2_17_i686.manylinux2014_i686.whl |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp38-cp38-macosx_10_9_x86_64.whl
| Download URL | topopy-1.0.4-cp38-cp38-macosx_10_9_x86_64.whl |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp37-cp37m-win_amd64.whl
| Download URL | topopy-1.0.4-cp37-cp37m-win_amd64.whl |
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| Size | 258.3 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Windows x86-64 |
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No |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp37-cp37m-win32.whl
| Download URL | topopy-1.0.4-cp37-cp37m-win32.whl |
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| Size | 206.5 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Windows x86-32 |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp37-cp37m-musllinux_1_1_x86_64.whl
| Download URL | topopy-1.0.4-cp37-cp37m-musllinux_1_1_x86_64.whl |
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| Size | 3.7 MB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Linux musl 1.1+ x86-64 |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp37-cp37m-musllinux_1_1_i686.whl
| Download URL | topopy-1.0.4-cp37-cp37m-musllinux_1_1_i686.whl |
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| Size | 3.6 MB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Linux musl 1.1+ x86-32 |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | topopy-1.0.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 3.2 MB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Linux glibc 2.17+ x86-64 |
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No |
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twine/4.0.1 CPython/3.9.15
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Release files / topopy-1.0.4-cp37-cp37m-manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | topopy-1.0.4-cp37-cp37m-manylinux_2_17_i686.manylinux2014_i686.whl |
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| Size | 3.1 MB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Linux glibc 2.17+ x86-32 |
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No |
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twine/4.0.1 CPython/3.9.15
|
Release files / topopy-1.0.4-cp37-cp37m-macosx_10_9_x86_64.whl
| Download URL | topopy-1.0.4-cp37-cp37m-macosx_10_9_x86_64.whl |
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| Size | 307.9 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc macOS 10.9+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
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twine/4.0.1 CPython/3.9.15
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