Differentiable incomplete beta function for PyTorch
Project description
torch-betainc
An implementation of the regularized incomplete beta function for PyTorch, with full gradient support for all parameters.
Features
- Fully Differentiable: Compute gradients with respect to all parameters (a, b, x)
- Vectorized: Supports batched computation with tensor inputs
- Numerically Stable: Uses continued fraction expansion with convergence tracking
- Configurable Precision: Adjustable parameters for accuracy/performance trade-off
- Well-Tested: Comprehensive test suite with gradient verification
- Easy to Use: Simple, intuitive API
Installation
From PyPI (recommended)
pip install torch-betainc
From source
git clone https://github.com/k-onoue/torch-betainc.git
cd torch-betainc
pip install -e .
With optional dependencies
# For development (testing)
pip install torch-betainc[dev]
# For examples (matplotlib, seaborn)
pip install torch-betainc[examples]
# For notebooks (jupyter, visualization)
pip install torch-betainc[notebook]
# All optional dependencies
pip install torch-betainc[dev,examples,notebook]
Quick Start
Incomplete Beta Function
import torch
from torch_betainc import betainc
# Single values
a = torch.tensor(2.0, requires_grad=True)
b = torch.tensor(3.0, requires_grad=True)
x = torch.tensor(0.5, requires_grad=True)
result = betainc(a, b, x)
print(result) # tensor(0.6875, grad_fn=<BetaincBackward>)
# Compute gradients
result.backward()
print(f"∂I/∂a = {a.grad}")
print(f"∂I/∂b = {b.grad}")
print(f"∂I/∂x = {x.grad}")
Batch Computation
import torch
from torch_betainc import betainc
# Batch computation
a = torch.tensor([1.0, 2.0, 3.0])
b = torch.tensor([1.0, 2.0, 3.0])
x = torch.tensor([0.3, 0.5, 0.7])
result = betainc(a, b, x)
print(result) # tensor([0.3000, 0.5000, 0.7840])
StudentT Distribution Class
import torch
from torch_betainc import StudentT
# Create a Student's t-distribution
dist = StudentT(df=torch.tensor(5.0))
# Sample from the distribution
samples = dist.sample((1000,))
# Compute CDF (differentiable!)
x = torch.tensor([0.0, 1.0, 2.0])
cdf = dist.cdf(x)
print(cdf) # tensor([0.5000, 0.8182, 0.9489])
# Compute log probability
log_prob = dist.log_prob(x)
# Compute gradients through CDF
x_grad = torch.tensor(1.0, requires_grad=True)
df_grad = torch.tensor(5.0, requires_grad=True)
dist_grad = StudentT(df=df_grad)
cdf_val = dist_grad.cdf(x_grad)
cdf_val.backward()
print(f"∂CDF/∂x = {x_grad.grad}")
print(f"∂CDF/∂df = {df_grad.grad}")
API Reference
betainc(a, b, x, epsilon=1e-14, min_approx=3, max_approx=500)
Compute the regularized incomplete beta function I_x(a, b).
Parameters:
a(torch.Tensor): First shape parameter. Must be positive.b(torch.Tensor): Second shape parameter. Must be positive.x(torch.Tensor): Upper limit of integration. Must be in [0, 1].epsilon(float, optional): Convergence threshold. Default: 1e-14.min_approx(int, optional): Minimum iterations before checking convergence. Default: 3.max_approx(int, optional): Maximum iterations for continued fraction. Default: 500.
Returns:
torch.Tensor: The value of I_x(a, b)
Examples:
# Standard usage
result = betainc(torch.tensor(2.0), torch.tensor(3.0), torch.tensor(0.5))
# Custom precision for faster computation
result = betainc(a, b, x, epsilon=1e-12, max_approx=200)
StudentT(df, loc=0.0, scale=1.0, validate_args=None)
Student's t-distribution class with differentiable CDF method.
This class extends PyTorch's distribution interface and provides all standard methods (sample, rsample, log_prob, entropy) plus a differentiable cdf method.
Parameters:
df(float or torch.Tensor): Degrees of freedom. Must be positive.loc(float or torch.Tensor, optional): Location parameter (mean). Default: 0.0.scale(float or torch.Tensor, optional): Scale parameter. Must be positive. Default: 1.0.validate_args(bool, optional): Whether to validate arguments. Default: None.
Methods:
sample(sample_shape): Generate samples from the distribution.rsample(sample_shape): Generate reparameterized samples (supports gradients).log_prob(value): Compute log probability density.cdf(value): Compute cumulative distribution function (differentiable).entropy(): Compute entropy of the distribution.
Properties:
mean: Mean of the distribution (undefined for df ≤ 1).mode: Mode of the distribution (equals loc).variance: Variance of the distribution (undefined for df ≤ 1, infinite for 1 < df ≤ 2).
Example:
# Create distribution
dist = StudentT(df=torch.tensor(5.0), loc=torch.tensor(0.0), scale=torch.tensor(1.0))
# Use like any PyTorch distribution
samples = dist.rsample((100,))
log_probs = dist.log_prob(samples)
# Compute differentiable CDF
x = torch.tensor(1.0, requires_grad=True)
cdf_val = dist.cdf(x)
cdf_val.backward() # Gradients flow through CDF!
Examples
The examples/ directory contains several demonstration scripts:
Basic Usage
python examples/basic_usage.py
This script demonstrates:
- Single value computation
- Batch processing
- Edge cases
- Gradient computation
- Broadcasting
Gradient Verification
python examples/gradient_verification.py
This script visually compares analytical gradients (from the custom autograd implementation) with numerical gradients (from finite differences) to verify correctness.
StudentT Distribution with CDF
python examples/studentt_cdf_example.py
This script demonstrates:
- Creating StudentT distributions
- Computing differentiable CDF values
- Gradient computation through CDF
- Batch computation with multiple distributions
- Comparison with PyTorch's built-in StudentT
- Visualization of CDF and PDF
- Using CDF in optimization problems
Testing
Run the test suite:
pytest tests/ -v
Run tests with coverage:
pytest tests/ --cov=torch_betainc --cov-report=html
Mathematical Background
Regularized Incomplete Beta Function
The regularized incomplete beta function is defined as:
I_x(a, b) = B(x; a, b) / B(a, b)
where:
B(x; a, b)is the incomplete beta functionB(a, b)is the complete beta function
This implementation uses a continued fraction expansion for numerical computation, with automatic switching based on the symmetry relation I_x(a, b) = 1 - I_{1-x}(b, a) to improve numerical stability.
Student's t-Distribution CDF
The CDF of Student's t-distribution is computed using the incomplete beta function:
For t = (x - loc) / scale,
CDF(x) = 1 - 0.5 * I_{df/(df+t²)}(df/2, 1/2) if t > 0
CDF(x) = 0.5 * I_{df/(df+t²)}(df/2, 1/2) if t ≤ 0
Implementation Details
- Continued Fraction: Uses a modified Lentz algorithm for the continued fraction expansion
- Convergence: Tracks convergence per element in batched computations
- Numerical Stability: Implements safeguards against division by zero and uses the symmetry relation
- Gradients: Computes analytical gradients for all parameters using custom backward pass
Performance Considerations
- The function uses iterative approximation with a default maximum of 500 iterations
- Convergence is typically achieved in fewer than 20 iterations for most inputs
- Batch processing is efficient due to vectorization
- Double precision (
torch.float64) is recommended for gradient checking - Precision parameters (
epsilon,max_approx) can be customized for performance tuning
Credits
This implementation is based on the work by Arthur Zwaenepoel:
- GitHub: https://github.com/arzwa/IncBetaDer
- Google Scholar: https://scholar.google.com/citations?user=8VSQd34AAAAJ&hl=en
The code has been refactored and extended to:
- Support full vectorization for batch processing
- Include comprehensive documentation and tests
- Add Student's t-distribution CDF
- Fix gradient computation for
gradcheckcompatibility
License
MIT License - see LICENSE file for details
Support
For bug reports and feature requests, please open an issue on GitHub.
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