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Phylogenetic inference with pytorch

Project description

# torchtree

[![Python package](https://github.com/4ment/torchtree/actions/workflows/python-package.yml/badge.svg)](https://github.com/4ment/torchtree/actions/workflows/python-package.yml)

## Installation

### Get the torchtree source `bash git clone https://github.com/4ment/torchtree cd torchtree `

### Install dependencies

Installing dependencies using Anaconda `bash conda env create -f environment.yml conda activate torchtree `

or using pip `bash pip install -r requirements.txt `

### Install torchtree `bash python setup.py install `

### Check install `bash torchtree --help `

### Quick start `bash torchtree examples/advi/fluA.json `

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