translate genes RNA/DNA to proteins (all 6 frames)
Project description
Useful tool to translate gene sequences to protein sequences
Description
This tool consists one module:
translate6frames: tool to translate gene sequences to protein sequences (all 6 frames)
Installation
Normal installation
pip install translate6frames
Development installation
git clone https://github.com/khaledianehdieh/translate6frames.git
Usage
python3
>>> from translate6frames import translate6frames as TF
>>> p= TF.translate6frames(FASTA_FILE, TYPE) # FASTA_FILE is the input gene file, the TYPE is "DNA", or "RNA"
>>> p.Output() # returns 6 fasta files, one for each frame (direct/reverse), and a csv file that contains all 6 frames in 6 columns
Change log
[0.1] - 2021-08-01
- Created
Release history Release notifications | RSS feed
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