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A Python library used to communicate with Trgen devices.

Project description

trgenpy

A Python library for IIT's Trgen Device device 🐍🧠 by AgliotiLab

PyPI version Python Version License pipeline status coverage report

The full documentation is available here.


Index


Getting started

To install this package use is required Python >= 3.9

pip install trgenpy

the import ways

# you can us it like this:
import trgenpy as tp
client = tp.TrgenClient()

# or like this:
from from trgenpy import TrgenClient,TrgenPin,active_for_us,unactive_for_us,end,wait_ne,wait_pe
client = TrgenClient()

Client

The TrgenClient is the object that stores all the information about the socket connection between you and the Trgen Device.
You can instantiate the TrgenClient object like this:

client = TrgenClient() 

Once the client object is created you can connect to Trgen Device...

client.connect()

...or check device availability

isAavailable = client.is_available() # true / false

Single Trgen Send

To send a defaul trigger signal (positive square with a logic state of 20µs) you can use the sendTrigger() function:

client.sendTrigger()

Custom Trigger Send

If you want to send trigger to a custom list inside the pinout you can use the sendCustomTrigger() function:

client.sendCustomTrigger([TrgenPin.NS0,TrgenPin.GPIO0])

Sending Markers

In order to send a marker value to all (Neuroscan,Synamps and GPIO) ports you can use the sendMarker() function:

client.sendMarker(13)

if you want invert the bit order, just flag the LSB argument (Trueby default)

client.sendMarker(13,LSB=False)

if you want to send different markers simultaiously on different ports you can use the arguments:

  • markerNS
  • markerSA
  • markerGPIO

like this:

client.sendMarker(markerNS=8,markerSA=2,markerGPIO=15)

Trgen

The Trgen object defines a single trigger behaviours through its id. This is the list of supported trigger_id values for the Trgen Device:

Trgen ID List

  • Neuroscan IDs The Neuroscan pinout (only for used pins) goes from 0 to 7
    • [NS0,NS1,NS2,NS3,NS4,NS5,NS6,NS7]
  • Synamps IDs The Neuroscan pinout (only for used pins) goes from 0 to 7
    • [SA0,SA1,SA2,SA3,SA4,SA5,SA6,SA7]
  • TMSI/O IDs
    • TMSO
    • TMSI
  • GPIO IDs The GPIO pinout goes from 0 to 7
    • [GPIO0,GPIO01,GPIO02,GPIO03,GPIO04,GPIO05,GPIO06,GPIO07]

You can instantiate the Trgen object with:

neuroScan = TrgenClient.create_trgen(TrgenPin.NS3)

passing ad only argument the constant from TrgenPin

Now you're ready to define the instruction set for Trgen with the set_instruction() function. Each trigger has a memory property, a list that can contain 32 instructions, so this function is defined:

def set_instruction(self, index, instruction):
# index: 0-32 value
# instruction: instruction_code

Each instruction code can be encoded using the Instruction Helpers

# call the function directly on the same Trgen object
neuroScan.set_instruction(0, active_for_us(5))
neuroScan.set_instruction(1, unactive_for_us(3))
# ...

Instruction Helpers

The supported instruction set for Trgen is:

Instruction 1° Param 2° Param Description
unactive_for_us(us) µ seconds duration Set the unactivation time for µ seconds
active_for_us(us) µ seconds duration Set the activation time for µ seconds
wait_pe(tr) Trgen ID Wait the positive edge for a specific Trgen ID
wait_ne(tr) Trgen ID Wait the negative edge for a specific Trgen ID
repeat(addr,time) Instruction address Time of repeat Set the activation time for µ seconds
end() End the behaviour
not_admissible() Empty instruction, it has to be placed after the end()

NOTE

Each Trgen can support a list of N instructions, where N = 2^MTML (Max Trgen Memory Length)

You can access to the mtml value by

# Add this in try block to manage errors
try:
    impl = client.get_implementation()
    mtml = impml.mtml
except InvalidAckError as e:
    print(f"⚠️ ACK sbagliato: {e}")
except AckFormatError as e:
    print(f"⚠️ ACK malformato: {e}")
except TimeoutError as e:
    print(f"⏱️ Timeout: {e}")

Native Commands

IIT's Trgen Device can receive some commands, the full instruction set includes:

  • Program Trigger
  • Start Trigger
  • Set GPIO I/O Direction
  • Request Implementation parameters
  • Request Trgen Status
  • Set the Trigger level
  • Get GPIO I/O Direction
  • Get the Trigger Level
  • Stop the Triggers

Program Trigger

You can program a trigger memory in two ways:

  1. Default trigger using program_default_trigger()
    This sets a predefined impulse of duration (default 20µs).
tr = client.create_trgen(TrgenPin.GPIO0)
client.program_default_trigger(tr, us=50)  # impulse of 50µs
  1. Advanced programming by manually setting instructions with set_instruction()
tr = client.create_trgen(TrgenPin.NS1)
tr.set_instruction(0, active_for_us(10))
tr.set_instruction(1, unactive_for_us(5))
tr.set_instruction(2, repeat(0, 3))
tr.set_instruction(3, end())
client.send_trigger_memory(tr)

Start Trigger

After programming triggers, you can start them with:

client.start()

This command makes the Trgen Device execute all programmed triggers.
Remember: you must have previously sent at least one trigger memory.

Set GPIO I/O Direction

the "byte" way

# Set GPIO directions (example: GPIO0-3 as outputs)
client.set_gpio_direction(0b00001111)

helper way

You can use this helper to build the complete or partial pinout map to set.

# we choose to set just GPIO0 -> High and the GPIO1 -> Low
mask = DirectionConfig().out(TrgenPin.GPIO0).in(TrgenPin.GPIO1).build()
# once you have it, you can use it as argument in the set_level function
client.set_gpio_direction(mask)

Request Implementation

You can get information about the hardware configuration (number of channels, memory length, etc.) with:

impl = client.get_implementation()
print(impl.memory_length)  # max number of instructions per trigger

Request Trgen Status

To check current status of triggers (active/inactive state):

status = client.get_status()
print(status)

This returns an integer bitmask where each bit represents the state of a trigger pin.

Set the Trigger level

the "byte" way

You can change polarity (active-high or active-low) of all triggers:

# Set all triggers active-high
client.set_level(0xFF)

# Set only GPIO0 active-high, rest active-low
client.set_level(0b00000001)

helper way

You can use this helper to build the complete or partial pinout map to set.

# we choose to set just GPIO0 -> High and the GPIO1 -> Low
mask = LevelConfig().high(TrgenPin.GPIO0, TrgenPin.TMSO).low(TrgenPin.GPIO1).build()
# once you have it, you can use it as argument in the set_level function
client.set_level(mask)

Get the GPIO I/O Direction

To retrieve the current GPIO configuration:

gpio_state = client.get_gpio_direction()
print(bin(gpio_state))

Get the Trigger Level

To check trigger polarity:

level = client.get_level()
print(bin(level))

E-Prime integration

trgenpy offers a wrapper version in order to integrate its behaviour inside the E-Prime software via Python COM-visible.

Install pywin32

pip install pywin32

Register the COM wrapper

python trgen_com.py --register

So that you can use in E-Prime like this

Dim tb
Set tb = CreateObject("Trgen Device.COM")

If tb.IsAvailable() Then
    tb.Connect
    tb.SendTrigger
    tb.SendMarker 13
Else
    MsgBox "Trgen Device not available!"
End If

E-Prime example

See here for the complete example

How to build

trgenpy uses setuptools to have a much clear and minimal build process.

Step 1 - install twine

pip install --upgrade build twine

Step 2 - build

python -m build

Step 3 - use it anywhere!

In the same directory (pwd) of this project, run: pip install .

Deploy

twine upload --repository testpypi dist/*

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