Extensible toolkit for analyzing turbulent flow datasets
Project description
turbx
About
turbx is a package for processing turbulent flow datasets. Primary data access classes are super()ed wrappers of h5py.File that make data & metadata access simple.
Installation
Install directly from PyPI
pip install --upgrade turbx
The --user flag can be added to install to ~/.local/lib/pythonX.Y/site-packages rather than site-packages of the python installation itself. This often required for HPC environments where the system python3 is used.
turbx can also be installed from source in editable mode (see setuptools docs) from the project root folder:
pip install --upgrade -e .
Dependencies
While most of the codebase can be transparently run on a single process, turbx is designed to use parallel HDF5 (wrapped by h5py) for high-performance collective MPI-IO with mpi4py. This requires:
- An MPI implementation such as
OpenMPIorMPICHandmpi4py - A parallel
HDF5installation andh5pybuilt withHDF5_MPI="ON"; see h5py docs
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