Two groups heatmap
Generate an heatmap comparing overlaps between 2 set of labels in a pandas dataframe. This is useful in single-cell to compare the overlap between two clustering methods or 2 sets of cell type labels.
Installation
pip install twogroups-heatmap
Usage
from twogroups_heatmap import intersection_heatmap
import pandas as pd
df = pd.DataFrame(
{
"cluster1": ["A", "A", "B", "B", "C", "C"],
"cluster2": ["A", "B", "B", "C", "C", "D"],
}
)
intersection_heatmap(df, xcol="cluster1", ycol="cluster2")
1 maintainer
Metadata
1 maintainer
Release files for twogroups-heatmap 0.1.3
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Source distribution (sdist)
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| twogroups_heatmap-0.1.3.tar.gz | 7.1 kB | Details |
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|---|---|---|---|---|
| twogroups_heatmap-0.1.3-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 13.7 kB
Release files / twogroups_heatmap-0.1.3.tar.gz
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