uniovi-simur-wearablepermed-pipeline 1.3.0

Uniovi Simur WearablePerMed Pipeline.

Description

Uniovi Simur WearablePerMed Pipeline.

For developing

Create project virtual environment:

$ python3 -m venv .venv
$ source .venv/bin/activate
$ pip install -r requirements.txt

Update project requirements:

$ pip freeze > requirements.txt

Build project. Don't forget update the version library from setup.cfg project build file

$ tox -e clean
$ tox -e build
$ tox -e docs
$ tox -e publish -- --repository pypi

Execute command test

python3 main.py \
    --verbose \
    --execute-steps 2,3,4,5,6 \
    --dataset-folder /home/miguel/git/uniovi/simur/uniovi-simur-wearablepermed-utils/data/input \
    --participants-missing-file /home/miguel/temp/wearablepermed_pipeline/missing_end_datetimes.csv \
    --crop-columns 1:7 \
    --window-size 250 \
    --window-overlapping-percent 50 \
    --ml-models ESANN,RandomForest \
    --ml-sensors thigh,hip,wrist \
    --output-case-folder /home/miguel/git/uniovi/simur/uniovi-simur-wearablepermed-utils/data/output \
    --case-id case_sample

Uniovi library

If you want upgrade the pipeline library to the last uniovi-simur-wearablepermed-utils you must execute this command (two times):

$ pip install uniovi-simur-wearablepermed-utils --upgrade

Note

This project has been set up using PyScaffold 4.6. For details and usage information on PyScaffold see https://pyscaffold.org/.