uwdf 0.0.1

Pelican Platform backed data loader

pelican-data-loader

Pelican-backed data loader prototype: demo

Quickstart

1. Install pelican-data-loader and pytorch from pypi

   pip install pelican-data-loader torch
   

2. Consume data with datasets

   from datasets import load_dataset
   dataset = load_dataset("csv", data_files="pelican://uwdf-director.chtc.wisc.edu/wisc.edu/dsi/pytorch/bird_migration_data.csv")
   torch_dataset = dataset.with_format("torch")
   

For more detailed example, see this notebook

Features

• Uses Croissant to store / validate metadata
• Uses pelicanfs to locate/cache dataset
• Uses datasets to convert to different ML data format (e.g., pytorch, tensorflow, jax, polars, pyarrow...)
• Provided dataset storage via UW-Madison's S3

Future features (Pending)

• doi minting via DataCite
• better frontend for dataset discover and publishing
• backup
• data prefetching? (at pelican layer?)
• private datasets
• telemetry?

Backend

• WISC-S3, storing
  • Actual datasets
  • Croissant JSONLD
• Postgres, storing
  • Various metadata
  • Links to pelican data source
  • Links to Croissant JSONLD

Dev notes

• Licenses data: pull from SPDX with pelican_data_loader.data.pull_license.
• minimal csv file croissant generator: pelican_data_loader.utils.parse_col.