VBZ-H5Py-Plugin
This module provides a plugin to H5Py for the VBZ (de)compression library.
VBZ Compression
VBZ compression is a compression algorithm developed by Oxford Nanopore to reduce file size and improve read/write performance when handling raw data in POD5/Fast5 files. Previously, the default compression was GZIP and comparing to GZIP we see a compression improvement of >30% and a CPU performance improvement of >10X for compression and >5X for decompression. Further details of the implementation and benchmarks can be found here: Nanoporetech/vbz_compression
Usage
Simply import the module to register the vbz plugin with h5py.
import vbz_h5py_plugin
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Metadata
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Release files for vbz-h5py-plugin 1.0.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| vbz_h5py_plugin-1.0.1.tar.gz | 1.4 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| vbz_h5py_plugin-1.0.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 2.9 MB
Release files / vbz_h5py_plugin-1.0.1.tar.gz
| Download URL | vbz_h5py_plugin-1.0.1.tar.gz |
|---|---|
| Size | 1.4 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
c784458bb0aad6303474cb2f10956179116b35555803fd1154eb4ef362519341
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BLAKE2b-256 checksum How to use checksums |
2243feb5016ab64d83f5a9cd0baa3da1f62c17a42764f44375fa59dbd576f6a0
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.1 CPython/3.7.15
|
Release files / vbz_h5py_plugin-1.0.1-py3-none-any.whl
| Download URL | vbz_h5py_plugin-1.0.1-py3-none-any.whl |
|---|---|
| Size | 1.4 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
7b8f9bf250a3c072e36bb8a84beb035468bba0536e11a9086649188f075589b1
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BLAKE2b-256 checksum How to use checksums |
d2ddeab7a9cac698afd8d4d469d703303390a88570ace01da358088459a6a48d
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.1 CPython/3.7.15
|
