Skip to main content

A comprehensive toolkit for Digital Signal Processing in healthcare applications.

Project description

Healthcare DSP Toolkit

GitHub stars Build Status

codecov

License: MIT

Python Versions Documentation Status PyPI Downloads PyPI version

This repository contains a comprehensive toolkit for Digital Signal Processing (DSP) in healthcare applications. It includes traditional DSP methods as well as advanced machine learning (ML) and deep learning (DL) inspired techniques. The toolkit is designed to process a wide range of physiological signals, such as ECG, EEG, PPG, and respiratory signals, with applications in monitoring, anomaly detection, and signal quality assessment.

Features

  • Filtering: Traditional filters (e.g., moving average, Gaussian, Butterworth) and advanced ML-inspired filters.
  • Transforms: Fourier Transform, DCT, Wavelet Transform, and various fusion methods.
  • Time-Domain Analysis: Peak detection, envelope detection, ZCR, and advanced segmentation techniques.
  • Advanced Methods: EMD, sparse signal processing, Bayesian optimization, and more.
  • Neuro-Signal Processing: EEG band power analysis, ERP detection, cognitive load measurement.
  • Respiratory Analysis: Automated respiratory rate calculation, sleep apnea detection, and multi-sensor fusion.
  • Signal Quality Assessment: SNR calculation, artifact detection/removal, and adaptive methods.
  • Monitoring and Alert Systems: Real-time anomaly detection, multi-parameter monitoring, and alert correlation.

Installation

You can install vitalDSP in two different ways:

Option 1: Install via pip

If you want the simplest installation method, you can install the latest version of vitalDSP directly from PyPI using pip:

pip install vitalDSP

Option 2: Install from the GitHub Repository

For those who prefer to have the latest version, including any recent updates that may not yet be available on PyPI, you can clone the repository and install it manually. Step 1: Clone the Repository First, clone the vitalDSP repository from GitHub to your local machine:

git clone https://github.com/Oucru-Innovations/vital-DSP.gi

Step 2: Navigate to the Project Directory Navigate to the directory where the repository was cloned:

cd vital-DSP

Step 3: Install with setup.py You can now install vitalDSP using the setup.py script:

python setup.py install

This method ensures that you are using the most up-to-date codebase from the repository.

Usage

Please read the instruction in the documentation for detailed usage examples and module descriptions.

Documentation

Comprehensive documentation for each module is available in the docs/ directory, covering usage examples, API references, and more.

Contributing

We welcome contributions! Please read the CONTRIBUTING.md file for guidelines on how to contribute to this project.

License

This project is licensed under the MIT License - see the LICENSE file for details.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

vitaldsp-0.1.1rc11.tar.gz (127.8 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

vitalDSP-0.1.1rc11-py3-none-any.whl (313.3 kB view details)

Uploaded Python 3

File details

Details for the file vitaldsp-0.1.1rc11.tar.gz.

File metadata

  • Download URL: vitaldsp-0.1.1rc11.tar.gz
  • Upload date:
  • Size: 127.8 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/5.1.1 CPython/3.10.14

File hashes

Hashes for vitaldsp-0.1.1rc11.tar.gz
Algorithm Hash digest
SHA256 562bb68b4440655011642fde3a9c5dd15bf4a64ca0793c722316903e90519d6e
MD5 680df03f0b42f8169389a81c6dbb2529
BLAKE2b-256 9c37aa265629074c6844ee2793607ccda7d02e2b690eb153a57443222dbe0a4f

See more details on using hashes here.

File details

Details for the file vitalDSP-0.1.1rc11-py3-none-any.whl.

File metadata

  • Download URL: vitalDSP-0.1.1rc11-py3-none-any.whl
  • Upload date:
  • Size: 313.3 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/5.1.1 CPython/3.10.14

File hashes

Hashes for vitalDSP-0.1.1rc11-py3-none-any.whl
Algorithm Hash digest
SHA256 9173730d5966ff65a280ca565ce3ce743e09e7428cc0ad555bc85d923cc81735
MD5 12d413ead841b78ad9065e236cd82061
BLAKE2b-256 81eef1b971ff89099d5977d3ed06c66ae82ab7dc39283de456445ef988c6c459

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page