Vivarium Dependencies is a code-less convenience metapackage that defines the dependency pins commonly shared across the Vivarium ecosystem.
Usage
A downstream repository can pull in groups of pins by referencing one or more extras of vivarium-dependencies in its pyproject.toml, e.g.:
[project]
dependencies = [
"vivarium-dependencies[numpy,pandas,scipy]",
...
]
[project.optional-dependencies]
interactive = ["vivarium-dependencies[interactive]"]
lint = ["vivarium-dependencies[lint]"]The package itself ships no Python modules; pip install vivarium-dependencies is not useful on its own. The point is the extras.
Installation
Supported Python versions: 3.11, 3.12, 3.13
You can install vivarium-dependencies from PyPI:
pip install vivarium-dependenciesor build it from source by cloning the monorepo and installing this lib:
git clone https://github.com/ihmeuw/vivarium-suite.git
cd vivarium-suite
pip install libs/dependenciesFor broader monorepo development setup, see the monorepo README at https://github.com/ihmeuw/vivarium-suite.
1 maintainer
Metadata
1 maintainer
Release files for vivarium-dependencies 1.3.0
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Source distribution (sdist)
| File | Size | Uploaded | |
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| vivarium_dependencies-1.3.0.tar.gz | 8.6 kB | Details |
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|---|---|---|---|---|
| vivarium_dependencies-1.3.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 12.1 kB
Release files / vivarium_dependencies-1.3.0.tar.gz
| Download URL | vivarium_dependencies-1.3.0.tar.gz |
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| Tags | Python 3 |
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