Minimal WFA2-lib wrapper in Python
Project description
Watersnake
Usage
>>> import watersnake
>>> aligner = watersnake.Aligner()
>>> aligner.align("ACTG", "ACTG")
'4M'
Building the package from source
Watersnake uses pixi for managing the build environment and tasks.
$ cd watersnake/
# Run the patch-conda-forge command only *once* after building a new Pixi environment since it modifies the WFA2-lib Conda package!
$ pixi run patch-conda-forge
$ pixi run twine-check
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