xarray-kat 0.0.5

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This package present an xarray view over observations in the MeerKAT archive.

Required Reading

You’ll need some familiarity with xarray. In particular:

• Indexing and selecting data

• Lazy Loading behaviour

Opening a dataset

Use xarray.open_datatree with engine="xarray-kat" (or let xarray infer the engine automatically from the URL). The call returns a xarray.DataTree whose children are the individual scans of the observation.

import xarray_kat  # registers the "xarray-kat" engine
import xarray

token = "eyFILLMEIN"
capture_block_id = 1234567890
url = (
    f"https://archive-gw-1.kat.ac.za/{capture_block_id}"
    f"/{capture_block_id}_sdp_l0.full.rdb?token={token}"
)

dt = xarray.open_datatree(url, engine="xarray-kat", chunked_array_type="xarray-kat", chunks={})

Each child node is keyed "<capture_block_id>_<stream_name>/<scan_index>" and exposes the MSv4-style data variables:

• VISIBILITY — complex correlator data, shape (time, baseline_id, frequency, polarization)

• WEIGHT — per-sample weights, same shape as VISIBILITY

• FLAG — per-sample flags, same shape as VISIBILITY

• UVW — baseline UVW coordinates, shape (time, baseline_id, uvw)

Parameters

All keyword arguments below are passed through xarray.open_datatree.

applycalstr or list of str, default ""

Calibration products to apply. Use "all" to apply every available product, an explicit list such as ["l1.G", "l1.B"] to apply specific products, or "" to skip calibration entirely.

scan_statesiterable of str, default ("scan", "track")

Only scans whose activity-sensor state appears in this collection are included in the tree. Pass e.g. ("track",) to keep only tracking scans.

uvw_sign_convention"casa" or "fourier", default "casa"

Sign convention for UVW coordinates. "casa" follows the antenna2 - antenna1 convention used by CASA and most radio-astronomy software. "fourier" uses the opposite sign.

van_vleck"off" or "autocorr", default "off"

Van Vleck correction for the MeerKAT F-engine quantisation distortion. "autocorr" corrects autocorrelation amplitudes using the built-in lookup table; "off" leaves the data unchanged.

preferred_chunksdict, optional

Preferred chunk sizes along named dimensions, e.g. {"time": 4, "frequency": 512}. These are hints; the engine uses the natural archive chunking where possible.

capture_block_idstr, optional

Override the capture-block ID inferred from the RDB file. Rarely needed in normal use; useful when the ID embedded in the file differs from the one in the URL.

stream_namestr, optional

Override the data-stream name inferred from the RDB file (e.g. "sdp_l0"). Useful when an observation contains multiple streams and you want to open a specific one.

Example Usage

Load a small observation entirely into memory:

import xarray_kat
import xarray

token = "eyFILLMEIN"
capture_block_id = 1234567890
url = (
    f"https://archive-gw-1.kat.ac.za/{capture_block_id}"
    f"/{capture_block_id}_sdp_l0.full.rdb?token={token}"
)

dt = xarray.open_datatree(url, chunked_array_type="xarray-kat", chunks={})
dt.load()

Select a subset of the data before loading:

ds = dt[f"{capture_block_id}_sdp_l0/0"].ds
ds = ds.isel(
    time=slice(10, 20),
    baseline_id=[1, 20, 30, 31, 32, 50],
    frequency=slice(256, 768),
)
ds.load()

Apply calibration solutions and Van Vleck correction:

dt = xarray.open_datatree(
    url,
    chunked_array_type="xarray-kat",
    chunks={},
    applycal="all",
    van_vleck="autocorr",
)

If dask is installed, request dask-backed chunks along specific dimensions:

# Natural (archive) chunking — most efficient
dt = xarray.open_datatree(url, chunks={})
dt = dt.compute()

# Custom chunking — may cause repeated archive requests for overlapping chunks;
# prefer rechunking on top of natural chunks, or use a cache pool
dt = xarray.open_datatree(
    url, chunks={"time": 20, "baseline_id": 155, "frequency": 256}
)
dt = dt.compute()