Efficiently convert XML data to Apache Arrow format.
Project description
xml2arrow-python
A Python package for efficiently converting XML files to Apache Arrow tables using a YAML configuration. Powered by the xml2arrow Rust crate for high performance.
Features
- ๐ High-performance XML parsing via the xml2arrow Rust crate
- ๐ Declarative mapping from XML structures to Arrow tables using a YAML config file
- ๐ Nested structure support with parentโchild index columns linking related tables
- ๐ฏ Type conversion including automatic scale and offset transforms for float fields
- ๐ก Attribute and element extraction using
@-prefixed path segments for attributes - โน๏ธ Early termination via
stop_at_pathsfor efficiently reading only part of a file - ๐ Flexible input โ accepts file paths, path-like objects, or any file-like object
Installation
pip install xml2arrow
Usage
1. Write a configuration file
The YAML configuration defines which parts of the XML document become tables and how their fields are typed. The full schema is:
parser_options:
trim_text: <true|false> # Trim whitespace from text nodes (default: false)
stop_at_paths: [<xml_path>] # Stop parsing after these closing tags (optional,
# useful for reading only a file header)
tables:
- name: <table_name> # Name of the resulting PyArrow RecordBatch
xml_path: <xml_path> # Path to the element whose children are rows.
# Use "/" to treat the whole document as one row.
levels: [<level>, ...] # Parent-link index columns โ see "Nested tables"
fields:
- name: <field_name> # Column name
xml_path: <field_path> # Path to the element or attribute holding the value.
# Prefix the last segment with @ for attributes
# (e.g. /library/book/@id)
data_type: <type> # Arrow data type โ see supported types below
nullable: <true|false> # Whether the field can be null (default: false)
# If false, missing/empty tags cause a ParseError.
scale: <number> # Multiply float values by this factor (optional)
offset: <number> # Add this value to float values after scaling (optional)
# value = (value * scale) + offset
Supported data types: Boolean, Int8, UInt8, Int16, UInt16, Int32,
UInt32, Int64, UInt64, Float32, Float64, Utf8
Boolean fields accept (case-insensitively): true, false, 1, 0, yes,
no, on, off, t, f, y, n.
2. Nested tables and levels
When your XML has a parentโchild relationship between tables, levels creates the
index columns that link child rows back to their parent rows. Each string in the
list names an element at a nesting boundary above the row element, and generates a
zero-based uint32 column named <level> in the output.
Note: If a table is defined purely to establish a structural hierarchy (i.e., it has levels defined but an empty fields list), it acts only as a boundary and will be excluded from the final output map.
For example, given stations that each have multiple measurements:
<report>
<monitoring_stations>
<monitoring_station> <!-- boundary โ produces <station> index -->
<measurements>
<measurement> <!-- row element for the measurements table -->
...
</measurement>
</measurements>
</monitoring_station>
</monitoring_stations>
</report>
- name: measurements
xml_path: /report/monitoring_stations/monitoring_station/measurements
levels: [station, measurement]
fields: [...]
This produces a <station> column (which parent station each measurement belongs
to) and a <measurement> column (the per-station row counter), letting you join
the measurements table back to the stations table on <station>.
3. Parse the XML
import polars as pl
from xml2arrow import XmlToArrowParser
parser = XmlToArrowParser("config.yaml")
record_batches = parser.parse("data.xml") # also accepts pathlib.Path or any file-like object
# Access a table by name
batch = record_batches["measurements"] # pyarrow.RecordBatch
# Convert to a pandas DataFrame
df = batch.to_pandas()
# Convert to a Polars DataFrame
df = pl.from_arrow(batch)
# Convert to a PyArrow Table
import pyarrow as pa
table = pa.Table.from_batches([batch])
parse() returns a dict[str, pyarrow.RecordBatch] whose keys are the table
names defined in your config. Because the values are standard PyArrow
RecordBatch objects they integrate directly with pandas, Polars, DuckDB,
and any other tool in the Arrow ecosystem.
Example
This example extracts meteorological station data from a nested XML document into three linked Arrow tables.
XML data (stations.xml)
<report>
<header>
<title>Meteorological Station Data</title>
<created_by>National Weather Service</created_by>
<creation_time>2024-12-30T13:59:15Z</creation_time>
</header>
<monitoring_stations>
<monitoring_station id="MS001">
<location>
<latitude>-61.39110459389277</latitude>
<longitude>48.08662749089257</longitude>
<elevation>547.1050788360882</elevation>
</location>
<measurements>
<measurement>
<timestamp>2024-12-30T12:39:15Z</timestamp>
<temperature unit="C">35.486545480326114</temperature>
<pressure unit="hPa">950.439973486407</pressure>
<humidity unit="%">49.77716576844861</humidity>
</measurement>
<measurement>
<timestamp>2024-12-30T12:44:15Z</timestamp>
<temperature unit="C">29.095166644493865</temperature>
<pressure unit="hPa">1049.3215015450517</pressure>
<humidity unit="%">32.5687148391251</humidity>
</measurement>
</measurements>
<metadata>
<description>Located in the Arctic Tundra area, used for Scientific Research.</description>
<install_date>2024-03-31</install_date>
</metadata>
</monitoring_station>
<monitoring_station id="MS002">
<location>
<latitude>11.891496388319311</latitude>
<longitude>135.09336983543022</longitude>
<elevation>174.53349357280004</elevation>
</location>
<measurements>
<measurement>
<timestamp>2024-12-30T12:39:15Z</timestamp>
<temperature unit="C">24.791842953632283</temperature>
<pressure unit="hPa">989.4054287187706</pressure>
<humidity unit="%">57.70794884397625</humidity>
</measurement>
<measurement>
<timestamp>2024-12-30T12:44:15Z</timestamp>
<temperature unit="C">15.153690541845911</temperature>
<pressure unit="hPa">1001.413052919951</pressure>
<humidity unit="%">45.45094598045342</humidity>
</measurement>
<measurement>
<timestamp>2024-12-30T12:49:15Z</timestamp>
<temperature unit="C">-4.022555715139081</temperature>
<pressure unit="hPa">1000.5225751769922</pressure>
<humidity unit="%">70.40117458947834</humidity>
</measurement>
<measurement>
<timestamp>2024-12-30T12:54:15Z</timestamp>
<temperature unit="C">25.852920542644185</temperature>
<pressure unit="hPa">953.762785698162</pressure>
<humidity unit="%">42.62088244545566</humidity>
</measurement>
</measurements>
<metadata>
<description>Located in the Desert area, used for Weather Forecasting.</description>
<install_date>2024-01-17</install_date>
</metadata>
</monitoring_station>
</monitoring_stations>
</report>
Configuration (stations.yaml)
tables:
- name: report
xml_path: /
levels: []
fields:
- name: title
xml_path: /report/header/title
data_type: Utf8
- name: created_by
xml_path: /report/header/created_by
data_type: Utf8
- name: creation_time
xml_path: /report/header/creation_time
data_type: Utf8
- name: stations
xml_path: /report/monitoring_stations
levels:
- station
fields:
- name: id
xml_path: /report/monitoring_stations/monitoring_station/@id
data_type: Utf8
- name: latitude
xml_path: /report/monitoring_stations/monitoring_station/location/latitude
data_type: Float32
- name: longitude
xml_path: /report/monitoring_stations/monitoring_station/location/longitude
data_type: Float32
- name: elevation
xml_path: /report/monitoring_stations/monitoring_station/location/elevation
data_type: Float32
- name: description
xml_path: /report/monitoring_stations/monitoring_station/metadata/description
data_type: Utf8
- name: install_date
xml_path: /report/monitoring_stations/monitoring_station/metadata/install_date
data_type: Utf8
- name: measurements
xml_path: /report/monitoring_stations/monitoring_station/measurements
levels:
- station # Links each measurement back to its parent station
- measurement
fields:
- name: timestamp
xml_path: /report/monitoring_stations/monitoring_station/measurements/measurement/timestamp
data_type: Utf8
- name: temperature
xml_path: /report/monitoring_stations/monitoring_station/measurements/measurement/temperature
data_type: Float64
offset: 273.15 # Convert ยฐC โ K
- name: pressure
xml_path: /report/monitoring_stations/monitoring_station/measurements/measurement/pressure
data_type: Float64
scale: 100.0 # Convert hPa โ Pa
- name: humidity
xml_path: /report/monitoring_stations/monitoring_station/measurements/measurement/humidity
data_type: Float64
Parsing and using the output
import polars as pl
from xml2arrow import XmlToArrowParser
parser = XmlToArrowParser("stations.yaml")
record_batches = parser.parse("stations.xml")
stations_df = pl.from_arrow(record_batches["stations"])
measurements_df = pl.from_arrow(record_batches["measurements"])
# Join measurements back to their parent station using the <station> index
merged = measurements_df.join(
stations_df.select(["<station>", "id"]),
on="<station>",
)
print(merged.select(["id", "timestamp", "temperature", "pressure"]))
Output
- report:
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโ
โ title โ created_by โ creation_time โ
โ --- โ --- โ --- โ
โ str โ str โ str โ
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโชโโโโโโโโโโโโโโโโโโโโโโโโโโโชโโโโโโโโโโโโโโโโโโโโโโโก
โ Meteorological Station Data โ National Weather Service โ 2024-12-30T13:59:15Z โ
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโดโโโโโโโโโโโโโโโโโโโโโโโโโโโดโโโโโโโโโโโโโโโโโโโโโโโ
- stations:
โโโโโโโโโโโโโฌโโโโโโโโฌโโโโโโโโโโโโโฌโโโโโโโโโโโโโฌโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโ
โ <station> โ id โ latitude โ longitude โ elevation โ description โ install_date โ
โ --- โ --- โ --- โ --- โ --- โ --- โ --- โ
โ u32 โ str โ f32 โ f32 โ f32 โ str โ str โ
โโโโโโโโโโโโโชโโโโโโโโชโโโโโโโโโโโโโชโโโโโโโโโโโโโชโโโโโโโโโโโโโชโโโโโโโโโโโโโโโโโโโโโโโโโชโโโโโโโโโโโโโโโก
โ 0 โ MS001 โ -61.391106 โ 48.086628 โ 547.105103 โ Located in the Arctic โ 2024-03-31 โ
โ โ โ โ โ โ Tundra aโฆ โ โ
โ 1 โ MS002 โ 11.891497 โ 135.093369 โ 174.533493 โ Located in the Desert โ 2024-01-17 โ
โ โ โ โ โ โ area, usโฆ โ โ
โโโโโโโโโโโโโดโโโโโโโโดโโโโโโโโโโโโโดโโโโโโโโโโโโโดโโโโโโโโโโโโโดโโโโโโโโโโโโโโโโโโโโโโโโโดโโโโโโโโโโโโโโโ
- measurements:
โโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโ
โ <station> โ <measurement> โ timestamp โ temperature โ pressure โ humidity โ
โ --- โ --- โ --- โ --- โ --- โ --- โ
โ u32 โ u32 โ str โ f64 โ f64 โ f64 โ
โโโโโโโโโโโโโชโโโโโโโโโโโโโโโโชโโโโโโโโโโโโโโโโโโโโโโโชโโโโโโโโโโโโโโชโโโโโโโโโโโโโโโโชโโโโโโโโโโโโก
โ 0 โ 0 โ 2024-12-30T12:39:15Z โ 308.636545 โ 95043.997349 โ 49.777166 โ
โ 0 โ 1 โ 2024-12-30T12:44:15Z โ 302.245167 โ 104932.150155 โ 32.568715 โ
โ 1 โ 0 โ 2024-12-30T12:39:15Z โ 297.941843 โ 98940.542872 โ 57.707949 โ
โ 1 โ 1 โ 2024-12-30T12:44:15Z โ 288.303691 โ 100141.305292 โ 45.450946 โ
โ 1 โ 2 โ 2024-12-30T12:49:15Z โ 269.127444 โ 100052.257518 โ 70.401175 โ
โ 1 โ 3 โ 2024-12-30T12:54:15Z โ 299.002921 โ 95376.27857 โ 42.620882 โ
โโโโโโโโโโโโโดโโโโโโโโโโโโโโโโดโโโโโโโโโโโโโโโโโโโโโโโดโโโโโโโโโโโโโโดโโโโโโโโโโโโโโโโดโโโโโโโโโโโโ
The <station> index in the measurements table links each measurement to its
parent station by row position, enabling a join on stations.<station> = measurements.<station>.
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