Synchrotron data analysis utilities and command-line macros.
Project description
Xommons is a collection of convenient tools for synchrotron data examination, assessment and analysis. It offers a range of utility functions that can be integrated into your workflow as well as a uv-managed command-line toolbox. For example:
xommons showptychodus ptychodus_para.hdf5 probe
will display the probes in a Ptychodus parameter HDF5 file.
Installation
Install uv, then install the package as a tool:
uv tool install .
Usage
If uv tells you its tool bin directory is not on PATH, run:
uv tool update-shell
After that, use the single launcher with subcommands:
xommons showh5 somefile.hdf5
xommons showprobe probe.npy
The same installed tool can be invoked through uvx:
uvx xommons showh5 somefile.hdf5
unwrap_phase has heavier optional dependencies. If you need that subcommand, install the tool with the unwrap-phase extra:
uv tool install '.[unwrap-phase]'
uvx xommons unwrap_phase phase.npy
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