xshelftransects 0.1.1

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xshelftransects

Build and sample cross-shelf transects from a binary boundary mask on model grids. Useful for understanding gravity current and coastally-trapped waves, which are defined by their orientation and proximity to the continental shelves.

Install

conda create --name xshelftransects python=3.11
conda activate xshelftransects
pip install -e .

Optional dependencies

• xesmf (for engine="xesmf" on curvilinear grids)
• scipy (for Theil-Sen based transect orientation)

Basic usage

import numpy as np
import xshelftransects

transects, geometry = xshelftransects.cross_shelf_transects(
    ds,
    "thetao",
    boundary_mask,  # binary mask: 0/1 interface is transect_length=0
    transect_length=np.arange(0.0, 200e3 + 2e3, 2e3),
    transect_spacing=10e3,
    crs="EPSG:3031",
    engine="xesmf",
)

Inputs and expectations

• ds["lon"], ds["lat"]: 2D longitude/latitude arrays.
• ds["deptho"]: ocean depth in meters, positive downward (deptho <= 0 treated as land/ice).
• boundary_mask: DataArray on the same grid as lon/lat; 0/1 interface is the boundary.
• crs: projected CRS in meters (e.g., "EPSG:3031" Antarctica, "EPSG:3413" Arctic, "EPSG:3857" global).

Outputs

• transects: sampled values with dims (..., section, transect_length) and lon/lat coords.
• geometry: Dataset with anchor points, normals, and boundary contour.