Skip to main content

A Python and JAX wrapper to create a coronagraph object from a yield input package

Project description

yippy logo

PyPI Documentation Status License Python


yippy

A Python and JAX library for loading coronagraph yield input packages (YIPs) and computing coronagraph performance metrics. yippy provides Fourier-based off-axis PSF interpolation, throughput/contrast/core-area curves, 2D performance maps, and export to EXOSIMS and AYO formats.

Installation

pip install yippy

Quick Start

from yippy import Coronagraph, fetch_yip

# Download an example YIP (cached after first call)
yip_path = fetch_yip("eac1_aavc")

# Create a coronagraph object
coro = Coronagraph(yip_path)

# Off-axis PSF at a given (x, y) position
from lod_unit import lod
offaxis_psf = coro.offax(2 * lod, 5 * lod)

# Performance metrics at any separation
throughput = coro.throughput(5.0)        # scalar or array
contrast   = coro.raw_contrast(5.0)
occ_trans  = coro.occulter_transmission(5.0)

# 2D performance maps (pixel grids)
throughput_map = coro.throughput_map()
core_area_map  = coro.core_area_map()

Two-Class Design

yippy provides two coronagraph classes for different use cases:

Coronagraph EqxCoronagraph
Purpose Full-featured analysis & export JIT-compiled simulation
Backend NumPy/SciPy + JAX Pure JAX/Equinox
JIT-compatible No Yes (eqx.filter_jit)
GPU/TPU support PSF generation only Everything
I/O & export EXOSIMS FITS, AYO CSV None (simulation only)
Performance curves Computed on init Converted from Coronagraph

Coronagraph -- Analysis & Data Management

The primary class for loading YIPs, computing performance curves, and exporting to external formats:

from yippy import Coronagraph

coro = Coronagraph("path/to/yip")

# 1D performance curves (scalar or array separations in lam/D)
coro.throughput(5.0)
coro.raw_contrast(5.0)
coro.occulter_transmission(5.0)
coro.core_area(5.0)
coro.core_mean_intensity(5.0)

# Noise floors
coro.noise_floor_exosims(5.0)           # |raw_contrast| / ppf
coro.noise_floor_ayo(5.0, ppf=30.0)     # core_mean_intensity / ppf

# 2D maps (full pixel grids)
coro.separation_map()
coro.throughput_map()
coro.core_area_map()
coro.core_mean_intensity_map()
coro.noise_floor_ayo_map(ppf=30.0)

# Export
coro.to_exosims()
coro.dump_ayo_csv("output.csv")

EqxCoronagraph -- JIT-Compatible Simulation

A pure JAX/Equinox module for use inside jax.jit-compiled pipelines:

from yippy import EqxCoronagraph
import equinox as eqx

# Create from a YIP path directly
coro = EqxCoronagraph("path/to/yip")

# All methods are JIT-traceable
@eqx.filter_jit
def simulate(coro, x, y):
    psf = coro.create_psf(x, y)
    stellar = coro.stellar_intens(0.01)
    throughput = coro.throughput(5.0)
    return psf, stellar, throughput

Performance Metrics

Individual metric functions are available in yippy.performance for standalone analysis:

from yippy.performance import (
    compute_throughput_curve,
    compute_raw_contrast_curve,
    compute_core_area_curve,
    compute_occ_trans_curve,
    compute_core_mean_intensity_curve,
    compute_truncation_throughput_curve,     # PSF truncation-ratio aperture
    compute_truncation_core_area_curve,
)

# Compute individual curves
separations, throughputs = compute_throughput_curve(coro)
separations, contrasts  = compute_raw_contrast_curve(coro)

PSF Truncation Ratio

When psf_trunc_ratio is set (e.g. Coronagraph(path, psf_trunc_ratio=0.3)), throughput and core area are computed using an adaptive aperture that includes all oversampled pixels exceeding ratio * peak. This matches AYO's photap_frac / omega_lod calculation and is recommended for ETC integration.

Example Data

yippy ships with pooch-managed example data for testing and notebooks:

from yippy import fetch_yip

# Downloads and caches an example apodized vortex coronagraph
yip_path = fetch_yip("eac1_aavc")

Units

Yield input packages use $\lambda / D$ units so yippy treats them as the default and uses the lod_unit package to define the lod unit. However, it can use three different astropy units: pixels (as defined by the yield input package), angular separation (angle units), or apparent separation (length units). If no units are provided it assumes the input is in $\lambda / D$.

import astropy.units as u
# pixels
x_pos = 2 * u.pix
y_pos = 5 * u.pix
offaxis_psf = coro.offax(x_pos, y_pos)

# angular separation
telescope_diameter = 10 * u.m
wavelength = 500 * u.nm
offaxis_psf = coro.offax(x_pos, y_pos, lam=wavelength, D=telescope_diameter)

# apparent separation
star_dist = 10 * u.pc
offaxis_psf = coro.offax(x_pos, y_pos, lam=wavelength, D=telescope_diameter, dist=star_dist)

JAX

yippy uses JAX for JIT compilation and GPU/TPU-accelerated PSF generation. JAX defaults to 32-bit precision; if you need 64-bit precision, configure it before importing yippy or any other JAX-based library:

# At the very top of your script
from hwoutils import enable_x64, set_platform

enable_x64()           # switch to float64
set_platform("cpu")    # or "gpu", "gpu,cpu" for fallback

# Now it's safe to import yippy
from yippy import Coronagraph

Or via environment variables (safest):

JAX_ENABLE_X64=True JAX_PLATFORMS=cpu python my_script.py

See the JAX Configuration Guide in hwoutils for details and common gotchas.

Constructor options

  • use_jax: Use JAX for PSF computation. Default is True.
  • x_symmetric: Off-axis PSFs are symmetric about the x-axis. Default is True.
  • y_symmetric: Off-axis PSFs are symmetric about the y-axis. Default is True.

Parallel processing of off-axis PSFs

The base call of coronagraph.offax(x,y) is the most user-friendly, but is not the most efficient. When generating many PSFs it is recommended to convert all required (x,y) positions into arrays of floats (in $\lambda / D$) and use the coronagraph.offax.create_psfs_parallel(x_arr, y_arr) function. This function uses JAX's shard_map to distribute the computation across multiple CPU devices.

To use multiple CPU devices, call hwoutils.set_host_device_count(N) or set XLA_FLAGS=--xla_force_host_platform_device_count=N before importing JAX. On GPU/TPU backends, yippy automatically uses vmap+jit instead of shard_map.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

yippy-2.6.0.tar.gz (4.6 MB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

yippy-2.6.0-py3-none-any.whl (57.4 kB view details)

Uploaded Python 3

File details

Details for the file yippy-2.6.0.tar.gz.

File metadata

  • Download URL: yippy-2.6.0.tar.gz
  • Upload date:
  • Size: 4.6 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.12

File hashes

Hashes for yippy-2.6.0.tar.gz
Algorithm Hash digest
SHA256 78829a31c6c95f1bca0329a4709e0ae46c963f5af24fabd18b8bf061b0766945
MD5 02ce70d4c4a0de5c04807944e7e19b1e
BLAKE2b-256 92656ead4581bd71ce6a02192672dac6d5b0b42dd28ef28dcdae0ed1fe91e050

See more details on using hashes here.

Provenance

The following attestation bundles were made for yippy-2.6.0.tar.gz:

Publisher: publish-to-pypi.yml on CoreySpohn/yippy

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file yippy-2.6.0-py3-none-any.whl.

File metadata

  • Download URL: yippy-2.6.0-py3-none-any.whl
  • Upload date:
  • Size: 57.4 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.12

File hashes

Hashes for yippy-2.6.0-py3-none-any.whl
Algorithm Hash digest
SHA256 e02170091d5a5fc6c75f51795314a71422a71835421a4f7b9a6f48039be0f91c
MD5 755f51ecc54e43371d7af15d14a581ff
BLAKE2b-256 7acc625757a18799c3d141c799ca9ac3cee2ccdb9c10641d36ce44bedab2ac5e

See more details on using hashes here.

Provenance

The following attestation bundles were made for yippy-2.6.0-py3-none-any.whl:

Publisher: publish-to-pypi.yml on CoreySpohn/yippy

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page