Standard components for automated data processing with Zocalo at Diamond Light Source
Diamond-specific Zocalo Tools
There are specialised versions of the services provided by Zocalo, and services which are useful at Diamond but are not central to Zocalo itself.
Much of the data analysis work at Diamond is directed by and presented to users through ISPyB. Therefore, we provide some central services which enable cooperation between the data analysis pipelines and the ISPyB database at Diamond.
The code in this repository is actively used for processing of many different experiments at Diamond. The hope is that soon it will be used across many areas of science here and perhaps elsewhere.
Please take this code inspiration for how to implement Zocalo at other facilities.
pip install zocalo-dls
This will add several service and wrapper entry points which should appear with:
zocalo.service --help zocalo.wrap --help
This package is maintained by a core team at Diamond Light Source.
To contribute, fork this repository and issue a pull request.
Pre-commit hooks are provided, please check code against these before submitting. Install with:
Add wrapper to run DAWN
Add wrapper to run Jupyter notebooks
Publish zocalo-dls to pypi.org
Add ISPyB service
Working to set this package up with best practices for Diamond teams to follow
Generic wrapper for GDA tasks
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