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zombi2_core

The compiled Rust engine behind ZOMBI2.

It runs ZOMBI2's built-in gene-family model (the order-free UnorderedGenome with shared duplication/transfer/loss/origination rates), which has no pure-Python fallback so that a given seed is reproducible against a single engine. Every other model in ZOMBI2 — species trees, traits, sequences, and the flexible genome rate models — runs in pure Python.

You normally do not install this package directly. It is a dependency of zombi2:

pip install zombi2

Binary wheels are published for Linux, macOS, and Windows and work on CPython 3.10 and newer (built against the stable ABI). If no wheel matches your platform, pip builds it from source, which requires a Rust toolchain.

Licensed under the MIT License, the same as ZOMBI2.

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Release files for zombi2-core 0.2.0

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Source distribution (sdist)

Source distribution for zombi2-core 0.2.0
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zombi2_core-0.2.0.tar.gz 23.7 kB With provenance Details for zombi2_core-0.2.0.tar.gz

Built distributions (wheels)

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zombi2_core-0.2.0-cp310-abi3-win_amd64.whl CPython 3.10 abi3 Windows x86-64 Details for zombi2_core-0.2.0-cp310-abi3-win_amd64.whl
zombi2_core-0.2.0-cp310-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl CPython 3.10 abi3 Linux glibc 2.17+ x86-64 Details for zombi2_core-0.2.0-cp310-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
zombi2_core-0.2.0-cp310-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl CPython 3.10 abi3 Linux glibc 2.17+ ARM64 Details for zombi2_core-0.2.0-cp310-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl
zombi2_core-0.2.0-cp310-abi3-macosx_11_0_arm64.whl CPython 3.10 abi3 macOS 11.0+ ARM64 Details for zombi2_core-0.2.0-cp310-abi3-macosx_11_0_arm64.whl
zombi2_core-0.2.0-cp310-abi3-macosx_10_12_x86_64.whl CPython 3.10 abi3 macOS 10.12+ x86-64 Details for zombi2_core-0.2.0-cp310-abi3-macosx_10_12_x86_64.whl

Total release size: 2.0 MB

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