Compiled Rust engine for ZOMBI2's built-in gene-family model
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zombi2_core
The compiled Rust engine behind ZOMBI2.
It runs ZOMBI2's built-in gene-family model (the order-free
UnorderedGenome with shared duplication/transfer/loss/origination rates),
which has no pure-Python fallback so that a given seed is reproducible against
a single engine. Every other model in ZOMBI2 — species trees, traits,
sequences, and the flexible genome rate models — runs in pure Python.
You normally do not install this package directly. It is a dependency of
zombi2:
pip install zombi2
Binary wheels are published for Linux, macOS, and Windows and work on
CPython 3.10 and newer (built against the stable ABI). If no wheel matches your
platform, pip builds it from source, which requires a
Rust toolchain.
Licensed under the MIT License, the same as ZOMBI2.
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