django-misa

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ISA organisation for metabolomic studies with Django

Further documentation available on ReadTheDocs

Quick start

Add “misa” and django application dependencies to your INSTALLED_APPS setting like this (misa should come before gfiles and mbrowse):

INSTALLED_APPS = [
    ...
    'misa',
    'mbrowse',
    'gfiles',

    'django_tables2',
    'django_tables2_column_shifter',
    'django_filters',
    'bootstrap3',
    'django_sb_admin',
    'dal',
    'dal_select2',
]

Include the polls URLconf in your project urls.py like this:

url(r'^', include('gfiles.urls')),
url('mbrowse/', include('mbrowse.urls')),
url('misa/', include('misa.urls')),

Run python manage.py migrate to create the misa models.
Start the development server and visit http://127.0.0.1:8000/misa/ilist/
Register http://127.0.0.1:8000/register/ and login http://127.0.0.1:8000/login/

Create an investigation http://127.0.0.1:8000/icreate/, study http://127.0.0.1:8000/icreate/, assay http://127.0.0.1:8000/icreate/acreate
Upload data to an assay http://127.0.0.1:8000/upload_assay_data_files/[assay-id]/
Add a protocol e.g. Chromatography protocol http://127.0.0.1:8000/cp_create
Add ontology information http://127.0.0.1:8000/search_ontologyterm

Metadata

Release files for django-misa 0.0.2

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Source distribution (sdist)

Source distribution for django-misa 0.0.2
File	Size	Uploaded	Provenance
django-misa-0.0.2.tar.gz	59.9 kB	Jul 30, 2019	Without provenance	Details

Built distribution (wheel)

Table of built distributions (wheels) for django-misa 0.0.2
File	Interpreter	ABI	Platform	Reset
django_misa-0.0.2-py3-none-any.whl 99.8 kB Jul 30, 2019 Without provenance	Python 3	none	any	Details

Total release size: 159.7 kB

Release files / django-misa-0.0.2.tar.gz

Download URL	django-misa-0.0.2.tar.gz
Size	59.9 kB
Tags	Source
SHA-256 checksum How to use checksums	`ab09e66f7a2628591bac41b222994fe3790d12f32a23726c69c01d4814a073c3`
BLAKE2b-256 checksum How to use checksums	`2444ab9b316b749349448468f2cf52061bf173df9c072d8424e9d9c46b3d15d3`
Upload date	Jul 30, 2019
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/1.13.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.32.2 CPython/3.7.3`

Release files / django_misa-0.0.2-py3-none-any.whl

Download URL	django_misa-0.0.2-py3-none-any.whl
Size	99.8 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`0e1d2117ed79379919488507a78cc5704c370f24d0a9e976036ae9410e26dc40`
BLAKE2b-256 checksum How to use checksums	`be93c32cabc649013397f6244391a95c222b76f20655fffe825d9d3a44deeb09`
Upload date	Jul 30, 2019
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/1.13.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.32.2 CPython/3.7.3`

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