fathomnet-py

fathomnet-py is a client-side API to help scientists, researchers, and developers interact with FathomNet Database data.

>>> from fathomnet.api import boundingboxes
>>> boundingboxes.find_concepts()
['2G Robotics structured light laser', '55-gallon drum', ...]
>>> from fathomnet.api import images
>>> images.find_by_concept('Nanomia')
[
    AImageDTO(
        id=2274942, 
        uuid='cdbfca66-284f-48ac-a36f-7b2ac2b43533', 
        url='https://database.fathomnet.org/static/m3/framegrabs/MiniROV/images/0056/02_18_37_20.png', 
        ...
    ),
    ...
]
>>> from fathomnet.api import taxa
>>> taxa.find_children('fathomnet', 'Bathochordaeus')
[
    Taxa(name='Bathochordaeus stygius', rank='species'), 
    Taxa(name='Bathochordaeus charon', rank='species'), 
    Taxa(name='Bathochordaeus mcnutti', rank='species')
]
>>> from fathomnet.api import xapikey
>>> xapikey.auth('NuCLjlNUlgHchtgDB01Sp1fABJVcWR')  # your API key here
AuthHeader(
    type='Bearer', 
    token='eyJhbGciOiJI...'
)

The fathomnet-py API offers native Python interaction with the FathomNet REST API, abstracting away the underlying HTTP requests.

Installing fathomnet-py

fathomnet-py is available on PyPI:

$ python -m pip install fathomnet

Examples

API Tutorial:

FathomNet Models:

API Reference available on Read the Docs