Lapels remaps reads aligned to the in silico genome back to the reference coordinate and annotates variants.
- Two files are taken as input:
a MOD file that is used to generate the in silico genome and
a BAM file that contains the in silico genome alignments.
Lapels will generate a new BAM file with corrected read positions, adjusted cigar strings, and annotated tags of variants (eg. SNPs, Insertions, and Deletions).
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Release files for lapels 1.1.1
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| lapels-1.1.1.tar.gz | 22.3 kB | Without provenance | Details for lapels-1.1.1.tar.gz |
Release files / lapels-1.1.1.tar.gz
| Download URL | lapels-1.1.1.tar.gz |
|---|---|
| Size | 22.3 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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Security for lapels 1.1.1
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