miRge3.0
An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output.
miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). For more details refer to documentation link below.
Links
Citation
Arun H Patil, Marc K Halushka. miRge3.0: a comprehensive microRNA and tRF sequencing analysis pipeline. NAR Genomics and Bioinformatics. 2021.
1 maintainer
Metadata
1 maintainer
Release files for mirge3 0.1.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| mirge3-0.1.4.tar.gz | 2.8 MB | Without provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| mirge3-0.1.4-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 5.6 MB
Release files / mirge3-0.1.4.tar.gz
| Download URL | mirge3-0.1.4.tar.gz |
|---|---|
| Size | 2.8 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
9e7ccd8d9c8f12f9f244ebcc7455ae5e0471db1d00fb8b639c969bd4cd862439
|
|
BLAKE2b-256 checksum How to use checksums |
e2e841d507a6dbe66fb09c1ac6152b3ee3cc1ebd2f998adf069ae502e5cc470f
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.26.0 setuptools/65.5.1 requests-toolbelt/0.9.1 tqdm/4.19.6 CPython/3.8.14
|
Release files / mirge3-0.1.4-py3-none-any.whl
| Download URL | mirge3-0.1.4-py3-none-any.whl |
|---|---|
| Size | 2.8 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
a01d613424f9db0d88dd37b7c7ff7bc99a50f21b1fe65974f2892bd44f7cb298
|
|
BLAKE2b-256 checksum How to use checksums |
ba5e52826893dbf0984103b2193a62a3cc2e2ac632d4debd1526226eda550925
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.26.0 setuptools/65.5.1 requests-toolbelt/0.9.1 tqdm/4.19.6 CPython/3.8.14
|
Security for mirge3 0.1.4
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
No provenance found
None of the files in this release were uploaded with provenance metadata.
A note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
