Map single-cell transcriptomes to copy number evolutionary trees. Check out the tutorial for more information.
Installation
$ pip install scatrex
SCATrEx uses JAX to perform automatic differentiation. By default, SCATrEx installs the CPU-only version of JAX, but we strongly recommend the use of GPU acceleration. Please follow the instructions in https://github.com/google/jax#pip-installation-gpu-cuda to install the GPU version of JAX.
Preprint
1 maintainer
Metadata
1 maintainer
Release files for scatrex 0.2.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| scatrex-0.2.0.tar.gz | 77.4 kB | Without provenance | Details for scatrex-0.2.0.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| scatrex-0.2.0-py3-none-any.whl | Python 3 | none | any | Details for scatrex-0.2.0-py3-none-any.whl |
Total release size: 159.2 kB
Release files / scatrex-0.2.0.tar.gz
| Download URL | scatrex-0.2.0.tar.gz |
|---|---|
| Size | 77.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.1 CPython/3.9.13
|
Release files / scatrex-0.2.0-py3-none-any.whl
| Download URL | scatrex-0.2.0-py3-none-any.whl |
|---|---|
| Size | 81.8 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.1 CPython/3.9.13
|
Security for scatrex 0.2.0
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