2 projects
retrvtme
retrvTME: Bulk RNA-seq Deconvolution with Tumor MicroEnvironment Retrieval retrvTME is a deep learning-powered tool designed to decode bulk RNA-seq data using large-scale single-cell atlases. The tool precisely reconstructs cell-type proportions and cell-type-specific gene expression profiles, with specialized capabilities for resolving intricate tumor microenvironment (TME) biology from bulk transcriptomes.
cellmanager
A Package for managing cell type about color and markers while processing scRNA-seq data.
