retrvTME: Bulk RNA-seq Deconvolution with Tumor MicroEnvironment Retrieval retrvTME is a deep learning-powered tool designed to decode bulk RNA-seq data using large-scale single-cell atlases. The tool precisely reconstructs cell-type proportions and cell-type-specific gene expression profiles, with specialized capabilities for resolving intricate tumor microenvironment (TME) biology from bulk transcriptomes.
Project description
retrvtme: Bulk RNA-seq Deconvolution with Tumor MicroEnvironment Retrieval
retrvTME is a deep learning-powered tool designed to decode bulk RNA-seq data using large-scale single-cell atlases. The tool precisely reconstructs cell-type proportions and cell-type-specific gene expression profiles, with specialized capabilities for resolving intricate tumor microenvironment (TME) biology from bulk transcriptomes.
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