Alistair

tableone

Last released Apr 26, 2025

tableone is a package for creating 'Table 1' summary statistics for a patient population.

dandelion-data-schema

Last released Aug 1, 2024

pydantic data structure expected by the Dandelion Algorithm Validation Service

ecghelper

Last released Jun 18, 2024

Tools to load and process electrocardiogram data.

mimic-utils

Last released Jan 6, 2024

Utilities to support building and analyzing the MIMIC database(s)

glowyr

Last released Oct 11, 2023

glowyr

physionet

Last released Jun 11, 2023

A collection of tools for working with the PhysioNet repository.

pyclipse

Last released Oct 18, 2022

Benchmark deidentification algorithms

pydact

Last released May 16, 2022

Redact information

alistair

Last released May 4, 2022

Miscellaneous tools

bert-deid

Last released Mar 18, 2021

Remove identifiers from data using BERT

pyroc

Last released Dec 7, 2019

Python tools for working with the AUROC

datathon2

Last released Aug 8, 2019

datathon2

oracle2postgres

Last released Feb 5, 2019

Migrate data from an Oracle to Postgres

pydeid

Last released Jan 31, 2019

Annotate and remove personal identifiers