Commands to compute direction vectors in volumetric brain regions. Direction vectors are 3D unit vectors associated to voxels of a brain region. They represent the directions of the fiber tracts.
Voxcell is a small library to handle probability distributions that have a spatial component and to use them to build collection of cells in space.
NeuroM: a light-weight neuron morphology analysis package
A morphology repair tool
Building and Using Knowledge Graphs made easy.
SONATA files reader
Knowledge Graphs analytics.
Python API for the Blue Brain BioExplorer
Blue Brain Project theme for Sphinx
Simple framework to create data validation workflows.
Tools to work with luigi
Library containing command lines and tools to compute volumetric cell densities in the rodent brain
Library containing command lines and tools to compute placement hints
CLI to split atlas regions and modify annotations accordingly
TMD: a python package for the topological analysis of neurons
Library containing common functions to build atlases
Python bindings for some CGAL classes
A neuron morphology IO library
Synthesis of artificial neurons using their topological profiles package
Runs cells from Blue Brain Project cell packages, such as sscx, synapse plasticity, etc.
Simulation and Neural network Analysis Productivity layer
BlueBrain I/O Library
Simple tool to compare directory contents.
Workflows used for morphology processing.
A collection of CLIs and python function related to morphology handling
Package that makes plotly easy
The Brayns renderer python API
Rockets python client
Graph API powered by RocksDB persistent key-value store for fast storage
Check usage STEPS subcellular simulator
Specify and run your benchmarks