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40 projects

Connectome-Utilities

Last released

Complex network representation and analysis layer

bluepyopt

Last released

Bluebrain Python Optimisation Library (bluepyopt)

efel

Last released

Electrophys Feature Extract Library (eFEL)

brayns

Last released

Brayns Python API

neurom

Last released

NeuroM: a light-weight neuron morphology analysis package

NeuroTS

Last released

Synthesis of artificial neurons using their topological profiles package.

bluepymm

Last released

Model Management Python Library (bluepymm)

EModelRunner

Last released

Runs cells from Blue Brain Project cell packages, such as sscx, synapse plasticity, etc.

atlas-densities

Last released

Library containing command lines and tools to compute volumetric cell densities in the rodent brain

libsonata

Last released

SONATA files reader

bluepyefe

Last released

Blue Brain Python E-feature extraction

emodel-generalisation

Last released

Generalisation of neuronal electrical models with MCMC

sphinx-bluebrain-theme

Last released

Blue Brain Project theme for Sphinx

nexusforge

Last released

Building and Using Knowledge Graphs made easy.

currentscape

Last released

Module to easily plot currentscape.

data-validation-framework

Last released

Simple framework to create data validation workflows.

MorphIO

Last released

A neuron morphology IO library

bluepysnap

Last released

Simulation and Neural network Analysis Productivity layer

voxcell

Last released

Voxcell is a small library to handle probability distributions that have a spatial component and to use them to build collection of cells in space.

atlas-splitter

Last released

CLI to split atlas regions and modify annotations accordingly

morphology-workflows

Last released

Workflows used for morphology processing.

TMD

Last released

A python package for the topological analysis of neurons.

dir-content-diff

Last released

Simple tool to compare directory contents.

brion

Last released

BlueBrain I/O Library

diameter-synthesis

Last released

Diametrize cells.

bioexplorer

Last released

Python API for the Blue Brain BioExplorer

luigi-tools

Last released

Tools to work with luigi.

NeuroR

Last released

A morphology repair tool

atlas-direction-vectors

Last released

Commands to compute direction vectors in volumetric brain regions. Direction vectors are 3D unit vectors associated to voxels of a brain region. They represent the directions of the fiber tracts.

morph-tool

Last released

A collection of CLIs and python function related to morphology handling

vascpy

Last released

Vasculature API

bluegraph

Last released

Knowledge Graphs analytics.

atlas-placement-hints

Last released

Library containing command lines and tools to compute placement hints

atlas-commons

Last released

Library containing common functions to build atlases

cgal-pybind

Last released

Python bindings for some CGAL classes

plotly-helper

Last released

Package that makes plotly easy

rockets

Last released

Rockets python client

basalt

Last released

Graph API powered by RocksDB persistent key-value store for fast storage

flake8-oist-steps

Last released

Check usage STEPS subcellular simulator

hpcbench

Last released

Specify and run your benchmarks

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