Skip to main content
Avatar for bbp.opensource from gravatar.com
Username    bbp.opensource
Date joined   Joined

57 projects

efel

Last released

Electrophys Feature Extract Library (eFEL)

bluepyefe

Last released

Blue Brain Python E-feature extraction

EModelRunner

Last released

Runs cells from Blue Brain Project cell packages, such as sscx, synapse plasticity, etc.

bluepyemodel

Last released

Blue Brain Python Electrical Modeling Pipeline

blueetl

Last released

Multiple simulations analysis tool

currentscape

Last released

Module to easily plot currentscape.

connectome-manipulator

Last released

A connectome manipulation framework for SONATA circuits

atlas-placement-hints

Last released

Library containing command lines and tools to compute placement hints

functionalizer

Last released

A PySpark implementation of the Blue Brain Project Functionalizer

blue-cwl

Last released

Common Workflow Language inspired workflow definitions.

entity-management

Last released

Access to production entity management

brainbuilder

Last released

BrainBuilder is a tool to define the cells that will compose a circuit.

psp-validation

Last released

PSP analysis tools

neuroc

Last released

NeuroC: a collection of tools for morphology cloning applications

brayns

Last released

Brayns Python API

neurodamus

Last released

A BBP Simulation Control application for NEURON

libsonata

Last released

SONATA files reader

bluepyopt

Last released

Bluebrain Python Optimisation Library (bluepyopt)

nexusforge

Last released

Building and Using Knowledge Graphs made easy.

ArchNGV

Last released

NGV architecture modules

neurom

Last released

NeuroM: a light-weight neuron morphology analysis package

brain-indexer

Last released

A spatial index implementation for spheres, morphologies and synapses

emodel-generalisation

Last released

Generalisation of neuronal electrical models with MCMC

NeuroR

Last released

A morphology repair tool

plotly-helper

Last released

Package that makes plotly easy

morph-tool

Last released

A collection of CLIs and python function related to morphology handling

vascpy

Last released

Vasculature API

TMD

Last released

A python package for the topological analysis of neurons.

atlas-densities

Last released

Library containing command lines and tools to compute volumetric cell densities in the rodent brain

NeuroTS

Last released

Synthesis of artificial neurons using their topological profiles package.

diameter-synthesis

Last released

Diametrize cells.

blueetl-core

Last released

Core transformations for BlueETL

fz-td-recipe

Last released

Read and modify parameters used in neuroscientific in silico circuit building.

dir-content-diff

Last released

Simple tool to compare directory contents.

data-validation-framework

Last released

Simple framework to create data validation workflows.

morphology-workflows

Last released

Workflows used for morphology processing.

morphio

Last released

A neuron morphology IO library

ngv-ctools

Last released

NGV Architecture c++ modules

Connectome-Utilities

Last released

Complex network representation and analysis layer

bluepymm

Last released

Model Management Python Library (bluepymm)

voxcell

Last released

Voxcell is a small library to handle probability distributions that have a spatial component and to use them to build collection of cells in space.

AstroVascPy

Last released

Simulating blood flow in vasculature

atlas-splitter

Last released

CLI to split atlas regions and modify annotations accordingly

BluePyParallel

Last released

Provides an embarrassingly parallel tool with sql backend.

sphinx-bluebrain-theme

Last released

Blue Brain Project theme for Sphinx

bluepysnap

Last released

Simulation and Neural network Analysis Productivity layer

atlas-direction-vectors

Last released

Commands to compute direction vectors in volumetric brain regions. Direction vectors are 3D unit vectors associated to voxels of a brain region. They represent the directions of the fiber tracts.

bioexplorer

Last released

Python API for the Blue Brain BioExplorer

atlas-commons

Last released

Library containing common functions to build atlases

brion

Last released

BlueBrain I/O Library

luigi-tools

Last released

Tools to work with luigi.

bluegraph

Last released

Knowledge Graphs analytics.

cgal-pybind

Last released

Python bindings for some CGAL classes

rockets

Last released

Rockets python client

basalt

Last released

Graph API powered by RocksDB persistent key-value store for fast storage

flake8-oist-steps

Last released

Check usage STEPS subcellular simulator

hpcbench

Last released

Specify and run your benchmarks

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page