Takes SeqRecordExpanded objects and creates datasets for phylogenetic software
Python Boilerplate contains all the boilerplate you need to create a Python package.
Another SeqRecord class with methods: degenerate seqs, codon positions based on reading frames, etc.
Python implementation of the Degen Perl package by Zwick et al.
It queries the BOLD database to get identification of taxa based on COI sequences
Tools to work in phylogenomics, from NSG group http://nymphalidae.utu.fi