10 projects
ResPredAI
Antimicrobial Resistance predictions via AI models
sarcostat
Sarcomeric sequence analysis with circular statistics and morphometry
MaldiBatchKit
Batch-effect correction methods for MALDI-TOF spectra in clinical AMR prediction workflows
MaldiAMRKit
A comprehensive toolkit for MALDI-TOF mass spectrometry data preprocessing for antimicrobial resistance (AMR) prediction purposes
MaldiDeepKit
A catalog of sklearn-compatible deep learning classifiers for MALDI-TOF binned spectra
phenocluster
Clinical Phenotype Discovery using Latent Class / Profile Analysis with Automatic Model Selection
crispr-cats
Comparing Cas Activities by Target Superimposition - find genomic regions nearby two distinct sequences of interest.
maldisuite
MaldiSuite: a Python ecosystem for MALDI-TOF spectral processing and analysis in antimicrobial resistance research
nestkit
Nested cross-validation toolkit with optional probability calibration, threshold optimization, and comprehensive diagnostics
combatlearn
Batch-effect harmonization for machine learning frameworks.
