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Florian Finkernagel

Username    ffinkernagel

28 projects

mbf-nested-intervals

Last released

mbf-bam

Last released

Helpers to deal with BAM files

mbf-gtf

Last released

Fast Parser for Ensembl formated GTF Files to Pandas DataFrames

marburg-biobank

Last released

Interface code to interact with data from the Ovara.net biobank.

sanetime-py3

Last released

A sane date/time python interface: better epoch time, timezones, and deltas -- django support as well. Now with python3 support

pypipegraph2

Last released

Advanced python 'what changed and what do we need to do' tracking

mbf-genomics

Last released

All about intervals on genomic data

mbf-comparisons

Last released

Add a short description here!

dicodon-optimizer

Last released

Dicodon optimization library

i3-instant-layout

Last released

Automatic 'list based' layouts for the i3 window manager

pypipegraph

Last released

A workflow (job) engine/pipeline for bioinformatics and scientific computing.

mbf-pandas-msgpack

Last released

Pandas interface to msgpack

solidpython-ff

Last released

Solidpython - fast and furious extension

mbf-externals

Last released

wrappers for external algorithms

mbf-genomes

Last released

wrappers for external algorithms

mbf-r

Last released

R interface code

rnaseqmixture

Last released

rnaseq mixture correction

mxp

Last released

qPCR fileformat reader

mbf-heatmap

Last released

swiss army heatmaps for delayed data frames and ChIPseq data

mbf-align

Last released

Alignment of high througput sequencing data

mbf-sampledata

Last released

sample data for testing other packages

mbf-qualitycontrol

Last released

various file formats

mbf-fileformats

Last released

various file formats

dppd-plotnine

Last released

Combines plotnine and dppd

dppd

Last released

A pythonic dplyr clone

mbf-anysnake

Last released

wrappers for docker+python+R+bioconductor

pyggplot

Last released

A Pythonic wrapper around R's ggplot

pydataframe

Last released

A DataFrame (table like datastructure) for Python, similar to R's dataframe based on numpy arrays

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