19 projects
hemonc-alchemy
SQLAlchemy-based models, regeneration tooling, and utilities for the HemOnc.org oncology terminology
oa-cohorts
Serialisation utilities for OMOP CDM cohorts and CQI builder
omop-constructs
For building complex constructs on top of the omop-alchemy library.
groundworkers
Groundworkers MCP server — read-only agentive access to OMOP vocabularies, concept graphs, and embeddings.
groundskeeping
Reusable Textual operator shell, workbench, configuration browser, and telemetry primitives.
omop-graph
Explainable, OMOP-native knowledge graph traversal and pathfinding
omop-emb
Embedding extension for OMOP CDM. Utilises sqlite-vec by default and provides an optional pgvector backend, and optionall FAISS export.
omop-alchemy
SQLAlchemy-based models, validation, and utilities for the OHDSI OMOP Common Data Model
orm-loader
Generic base classes to handle ORM functionality for multiple downstream datamodels
oa-configurator
Shared configuration and database-resolution layer for the OMOP-oriented stack.
pbs-client
Offline-first client and local mirror for the Australian PBS Public Data API v3
groundstore
Shared mapping-task contracts for Groundworkers workflows.
ohdsi-prompt-registry
Groundworkers registry for agent-facing OHDSI prompt packs.
omop-semantics
Define, validate, and use schema-backed semantic conventions for OMOP CDM
oa-cohort-author
Stable authoring service layer for oa-cohorts
cava-nlp
CaVa Platform Natural Language Processing spaCy components and pipeline
schemancer
Data-first registry compiler for loadable ORM packages.
cava-llm-manager
None
prompt-spec
Lightweight pydantic wrapper prompting library to support sharing of oncology-related LLM prompts
