33 projects
himena
An infinitely extensible and reusable application framework.
himena-lmfit
Curve fitting and optimization in himena
himena-relion
RELION GUI implemented as a himena plugin
acryo
An extensible cryo-EM/ET toolkit for Python.
magic-class
Generate multifunctional GUIs from classes
himena-cryoem-io
File readers and writers for cryo-EM
impy-array
Speed up coding/extending image analysis in Python.
starfile-rs
None
cylindra
Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures
cylindra-moire-analysis
Plugin for traditional moire pattern analysis of microtubules
himena-image
Himena plugin for image processing and analysis
macro-kit
Macro recording and metaprogramming in Python
napari-filaments
Plugin for filament analysis
napari-roi-manager
A ROI Manager Widget with an UI similar to ImageJ
sfhmm
step-finding-based HMM
napari-himena
Pipeline between napari and himena
himena-bio
Plasmid editor and basic bioinformatic analysis in himena
himena-stats
Statistical testing and modeling in himena.
himena-seaborn
Calling seaborn plotting functions in himena
whitecanvas
A type safe and backend independent plotting library for Python.
structured-array
Efficient manipulation of the numpy structured arrays.
tabulous
A table data viewer for Python
qt-command-palette
A command palette widget for Qt applications
scikit-step
1-D step detection algorithms
unformat
Python string unformatter.
napari-spreadsheet
A spreadsheet widget for napari
napari-result-stack
Widgets and type annotations for storing function results of any types
napari-macrokit
Executable script generation for napari plugins
collections-undo
General undo/redo framework for Python
napari-power-widgets
Powerful widgets and type annotations for napari plugin widgets
elegant-json
Deal with JSON in an elegant way
napari-text-layer
Text layer for bio-image annotation.
napari-multitask
Multitasking in napari
