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File readers and writers for cryo-EM

Project description

himena-cryoem-io

PyPI - Version PyPI - Python Version


Read and write files related to cryogenic electron microscopy (cryo-EM).

This plugin supports file I/O for:

  • RELION .star file as a table stack widget.
  • SerialEM .nav file as a SerialEM-like widget.
  • SerialEM .mdoc file as a table widget.
  • cryoSPARC .cs file as a table widget.
  • CTFFind .ctf file as an image widget.
  • IMOD .xf/.prexf file as a table widget.

Installation

himena <my-profile> --get himena-cryoem-io

or manually via pip:

pip install himena-cryoem-io
himena <my-profile> --install himena-cryoem-io

License

himena-cryoem-io is distributed under the terms of the BSD 3-Clause license.

Project details


Download files

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Source Distribution

himena_cryoem_io-0.1.1.tar.gz (767.2 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

himena_cryoem_io-0.1.1-py3-none-any.whl (15.7 kB view details)

Uploaded Python 3

File details

Details for the file himena_cryoem_io-0.1.1.tar.gz.

File metadata

  • Download URL: himena_cryoem_io-0.1.1.tar.gz
  • Upload date:
  • Size: 767.2 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: python-httpx/0.27.2

File hashes

Hashes for himena_cryoem_io-0.1.1.tar.gz
Algorithm Hash digest
SHA256 52151e1f15e6bd3ef63640e2af23d0d61c3d016f988d8cee2a5917b6deeb6ac2
MD5 8eb389ca8ab9c76ab68c5d91a0717454
BLAKE2b-256 c150ce7bfff303ffb5997ec1c3024ddd1e0059c4541f72e6419d98d2d1e81dad

See more details on using hashes here.

File details

Details for the file himena_cryoem_io-0.1.1-py3-none-any.whl.

File metadata

File hashes

Hashes for himena_cryoem_io-0.1.1-py3-none-any.whl
Algorithm Hash digest
SHA256 a4a679d91cf467a6cf6e2bf2cc019adba22f77ef5f0a5653ecd73f0bcb432d91
MD5 0e51944731720c709c617caee4c7da8a
BLAKE2b-256 2f45862636b4043d4555139322727614b23e28d282191d7ead86c115e33ee67c

See more details on using hashes here.

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