7 projects
arda-mapper
Antigen Receptor Domain Annotation — fast TCR/BCR FR/CDR region annotation
mirpy-lib
ML-oriented embeddings for immune receptor repertoires (TCR/BCR)
vdjtools
TCR/BCR repertoire analysis — Pgen/generation/inference, diversity, overlap, biomarkers (Python + C++)
vdjmatch
Fast, control-calibrated annotation of T-cell receptor antigen specificity
seqtree
Fast fuzzy search over biological sequences (C++ core, Python bindings)
tcren
Structure-based prediction of TCR recognition of epitopes via residue-level statistical potentials
mhcmatch
Peptide-MHC presentation, cross-reactivity and motif tools on the seqtree substrate
